G366973


Basic Information

Item Value
gene id G366973
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11425642 ~ 11428710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417153
aggatatatacagggggtaccggtaccgagtcaatgtggaggttatatacaggaggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggatatatacaggaggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacc
>TU417154
aggatatatacagggggtaccggtaccgagtcaatgtggaggttatatacaggaggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtaccgagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggctatatacaggaggtaccggtactgagtcaatgtggaggctatatacagggggtaccggtaccgagtcaatgtggaggttatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccagtactgagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggaggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417153 False 300 lncRNA 0.50 2 11425642 11428710
TU417154 True 651 TUCP 0.50 3 11425642 11428710

Neighbor

gene id symbol gene type direction distance location
LOC110523188 pde4d coding upstream 6709 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 421001 10984720 ~ 11004641 (+)
LOC110523186 LOC106571348 coding upstream 441129 10974098 ~ 10984513 (+)
ppp2cb LOC105021738 coding upstream 461920 10953016 ~ 10963722 (+)
LOC110523183 tex15 coding upstream 474441 10931536 ~ 10951201 (+)
LOC110524952 NA coding downstream 73933 11502643 ~ 11507284 (+)
LOC110523192 plk2 coding downstream 78979 11507689 ~ 11513262 (+)
trnaa-agc-2 NA coding downstream 172750 11601460 ~ 11601532 (+)
phax phax coding downstream 375210 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 404199 11832909 ~ 11854832 (+)
G366969 NA non-coding upstream 2841 11422577 ~ 11422801 (+)
G366777 NA non-coding upstream 159645 11146283 ~ 11265997 (+)
G366874 NA non-coding upstream 256205 11169065 ~ 11169437 (+)
G366861 NA non-coding upstream 275729 11149623 ~ 11149913 (+)
G366797 NA non-coding upstream 374547 11049374 ~ 11051095 (+)
G366977 NA non-coding downstream 4957 11433667 ~ 11437320 (+)
G367014 NA non-coding downstream 58738 11487448 ~ 11488048 (+)
G367420 NA non-coding downstream 113888 11542598 ~ 11542839 (+)
G367424 NA non-coding downstream 118334 11547044 ~ 11547288 (+)
G367431 NA non-coding downstream 123785 11552495 ~ 11552834 (+)
G366748 NA other upstream 448490 10976682 ~ 10977152 (+)
G365197 NA other upstream 1576488 9848703 ~ 9849154 (+)
G364850 NA other upstream 2196411 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2579526 8775134 ~ 8849107 (+)
G362662 NA other upstream 3506077 7918922 ~ 7919565 (+)
G367684 NA other downstream 449619 11878329 ~ 11880035 (+)
G368440 NA other downstream 1679986 13108696 ~ 13109134 (+)
G369763 NA other downstream 2336537 13765247 ~ 13769296 (+)
G370360 NA other downstream 2827093 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2892394 14321104 ~ 14325895 (+)

Expression


Co-expression Network