G367420


Basic Information

Item Value
gene id G367420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11542598 ~ 11542839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417630
AAGGTAGGTTGCACAACTGAGTGTATAACAGAAGGAGGGTTGTTTGTTAAGCAAACGATAATGAGTTGAGCGTTGTCAGGCCAACAAAGAAAAAGTGCATAGTGAAAAAACAAGAAAACATTCATAAGAGCACAAACAGAGAGAATGAAgacaacagagaaagagagtgggagagggaaagagagagattaaaACCGTGAACATGTGTGTGCCACTCCCCTCACATTCCAGAACAATACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417630 True 242 lncRNA 0.41 1 11542598 11542839

Neighbor

gene id symbol gene type direction distance location
LOC110523192 plk2 coding upstream 29336 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 35314 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 123665 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 537957 10984720 ~ 11004641 (+)
LOC110523186 LOC106571348 coding upstream 558085 10974098 ~ 10984513 (+)
trnaa-agc-2 NA coding downstream 58621 11601460 ~ 11601532 (+)
phax phax coding downstream 261081 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 290070 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 376899 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 404162 11947001 ~ 12051563 (+)
G367014 NA non-coding upstream 54550 11487448 ~ 11488048 (+)
G366977 NA non-coding upstream 105278 11433667 ~ 11437320 (+)
G366973 NA non-coding upstream 113888 11425642 ~ 11428710 (+)
G366969 NA non-coding upstream 119797 11422577 ~ 11422801 (+)
G366874 NA non-coding upstream 373161 11169065 ~ 11169437 (+)
G367424 NA non-coding downstream 4205 11547044 ~ 11547288 (+)
G367431 NA non-coding downstream 9656 11552495 ~ 11552834 (+)
G367436 NA non-coding downstream 11658 11554497 ~ 11554732 (+)
G367480 NA non-coding downstream 49073 11591912 ~ 11592378 (+)
G367505 NA non-coding downstream 65880 11608719 ~ 11611874 (+)
G366748 NA other upstream 565446 10976682 ~ 10977152 (+)
G365197 NA other upstream 1693444 9848703 ~ 9849154 (+)
G364850 NA other upstream 2313367 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2696482 8775134 ~ 8849107 (+)
G367684 NA other downstream 335490 11878329 ~ 11880035 (+)
G368440 NA other downstream 1565857 13108696 ~ 13109134 (+)
G369763 NA other downstream 2222408 13765247 ~ 13769296 (+)
G370360 NA other downstream 2712964 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2778265 14321104 ~ 14325895 (+)

Expression


Co-expression Network