Gene
RNA
| Item | Value |
|---|---|
| gene id | G367480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 11591912 ~ 11592378 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU417691 | True | 259 | lncRNA | 0.43 | 2 | 11591912 | 11592378 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523192 | plk2 | coding | upstream | 78650 | 11507689 ~ 11513262 (+) |
| LOC110524952 | NA | coding | upstream | 84628 | 11502643 ~ 11507284 (+) |
| LOC110523188 | pde4d | coding | upstream | 172979 | 11026101 ~ 11418933 (+) |
| depdc1b | depdc1b | coding | upstream | 587271 | 10984720 ~ 11004641 (+) |
| LOC110523186 | LOC106571348 | coding | upstream | 607399 | 10974098 ~ 10984513 (+) |
| trnaa-agc-2 | NA | coding | downstream | 9082 | 11601460 ~ 11601532 (+) |
| phax | phax | coding | downstream | 211542 | 11803920 ~ 11808076 (+) |
| lmnb1 | lmnb1 | coding | downstream | 240531 | 11832909 ~ 11854832 (+) |
| LOC110523202 | NA | coding | downstream | 327360 | 11919738 ~ 11922926 (+) |
| megf10 | megf10 | coding | downstream | 354623 | 11947001 ~ 12051563 (+) |
| G367436 | NA | non-coding | upstream | 37180 | 11554497 ~ 11554732 (+) |
| G367431 | NA | non-coding | upstream | 39078 | 11552495 ~ 11552834 (+) |
| G367424 | NA | non-coding | upstream | 44624 | 11547044 ~ 11547288 (+) |
| G367420 | NA | non-coding | upstream | 49073 | 11542598 ~ 11542839 (+) |
| G367014 | NA | non-coding | upstream | 103864 | 11487448 ~ 11488048 (+) |
| G367505 | NA | non-coding | downstream | 16341 | 11608719 ~ 11611874 (+) |
| G367506 | NA | non-coding | downstream | 20930 | 11613308 ~ 11613608 (+) |
| G367520 | NA | non-coding | downstream | 25742 | 11618120 ~ 11618340 (+) |
| G367529 | NA | non-coding | downstream | 40110 | 11632488 ~ 11632839 (+) |
| G367530 | NA | non-coding | downstream | 40641 | 11633019 ~ 11633228 (+) |
| G366973 | NA | other | upstream | 163202 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 614760 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 1742758 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 2362681 | 9228838 ~ 9229231 (+) |
| cdc42se2 | cdc42se2 | other | upstream | 2745796 | 8775134 ~ 8849107 (+) |
| G367684 | NA | other | downstream | 285951 | 11878329 ~ 11880035 (+) |
| G368440 | NA | other | downstream | 1516318 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 2172869 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2663425 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2728726 | 14321104 ~ 14325895 (+) |
