Gene
RNA
| Item | Value |
|---|---|
| gene id | G367549 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 11674541 ~ 11674763 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU417766 | True | 223 | lncRNA | 0.39 | 1 | 11674541 | 11674763 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-agc-2 | NA | coding | upstream | 73009 | 11601460 ~ 11601532 (+) |
| LOC110523192 | plk2 | coding | upstream | 161279 | 11507689 ~ 11513262 (+) |
| LOC110524952 | NA | coding | upstream | 167257 | 11502643 ~ 11507284 (+) |
| LOC110523188 | pde4d | coding | upstream | 255608 | 11026101 ~ 11418933 (+) |
| depdc1b | depdc1b | coding | upstream | 669900 | 10984720 ~ 11004641 (+) |
| phax | phax | coding | downstream | 129157 | 11803920 ~ 11808076 (+) |
| lmnb1 | lmnb1 | coding | downstream | 158146 | 11832909 ~ 11854832 (+) |
| LOC110523202 | NA | coding | downstream | 244975 | 11919738 ~ 11922926 (+) |
| megf10 | megf10 | coding | downstream | 272238 | 11947001 ~ 12051563 (+) |
| prrc1 | prrc1 | coding | downstream | 382189 | 12056952 ~ 12093392 (+) |
| G367548 | LOC106571253 | non-coding | upstream | 1121 | 11667987 ~ 11673420 (+) |
| G367540 | LOC106571259 | non-coding | upstream | 26912 | 11647257 ~ 11647629 (+) |
| G367535 | NA | non-coding | upstream | 35391 | 11638871 ~ 11639150 (+) |
| G367532 | NA | non-coding | upstream | 39239 | 11635093 ~ 11635302 (+) |
| G367530 | NA | non-coding | upstream | 41313 | 11633019 ~ 11633228 (+) |
| G367550 | NA | non-coding | downstream | 426 | 11675189 ~ 11675396 (+) |
| G367557 | NA | non-coding | downstream | 8871 | 11683634 ~ 11683912 (+) |
| G367558 | NA | non-coding | downstream | 9995 | 11684758 ~ 11684978 (+) |
| G367562 | LOC105030512 | non-coding | downstream | 18143 | 11692906 ~ 11693137 (+) |
| G367563 | NA | non-coding | downstream | 19657 | 11694420 ~ 11694639 (+) |
| G366973 | NA | other | upstream | 245831 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 697389 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 1825387 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 2445310 | 9228838 ~ 9229231 (+) |
| cdc42se2 | cdc42se2 | other | upstream | 2828425 | 8775134 ~ 8849107 (+) |
| G367684 | NA | other | downstream | 203566 | 11878329 ~ 11880035 (+) |
| G368440 | NA | other | downstream | 1433933 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 2090484 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2581040 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2646341 | 14321104 ~ 14325895 (+) |
