G367563


Basic Information

Item Value
gene id G367563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11694420 ~ 11694639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417780
accttggcttctactgcattcgcgtaacaggcagtctccttgtggagtgcacaaggactagttaactgtaaggttgcaagattgaatcccccgagctgacaaggtgaaaatctgtcgttctgcccctgaacgaggtagttaacccaccgttcctaggccgtcattgaaaataagaatgtgtttttaactgacttgcctagttaaaaatattaaataaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417780 True 220 lncRNA 0.44 1 11694420 11694639

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 92888 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 181158 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 187136 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 275487 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 689779 10984720 ~ 11004641 (+)
phax phax coding downstream 109281 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 138270 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 225099 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 252362 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 362313 12056952 ~ 12093392 (+)
G367562 LOC105030512 non-coding upstream 1283 11692906 ~ 11693137 (+)
G367558 NA non-coding upstream 9442 11684758 ~ 11684978 (+)
G367557 NA non-coding upstream 10508 11683634 ~ 11683912 (+)
G367550 NA non-coding upstream 19024 11675189 ~ 11675396 (+)
G367549 NA non-coding upstream 19657 11674541 ~ 11674763 (+)
G367565 NA non-coding downstream 2463 11697102 ~ 11697330 (+)
G367613 NA non-coding downstream 10272 11704911 ~ 11705213 (+)
G367628 NA non-coding downstream 51231 11745870 ~ 11746091 (+)
G367631 NA non-coding downstream 53835 11748474 ~ 11749971 (+)
G367630 NA non-coding downstream 55489 11750128 ~ 11752425 (+)
G366973 NA other upstream 265710 11425642 ~ 11428710 (+)
G366748 NA other upstream 717268 10976682 ~ 10977152 (+)
G365197 NA other upstream 1845266 9848703 ~ 9849154 (+)
G364850 NA other upstream 2465189 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2848304 8775134 ~ 8849107 (+)
G367684 NA other downstream 183690 11878329 ~ 11880035 (+)
G368440 NA other downstream 1414057 13108696 ~ 13109134 (+)
G369763 NA other downstream 2070608 13765247 ~ 13769296 (+)
G370360 NA other downstream 2561164 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2626465 14321104 ~ 14325895 (+)

Expression


Co-expression Network