G367628


Basic Information

Item Value
gene id G367628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11745870 ~ 11746091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417845
CTCTGCGTTGAATGAAAAACAATGTCAAGTATCCAGTGTCATTCCAATAATTGGTTCCCTTGTGCAAAAATGAATTGTGCTAAAAATAAAACTCAGGCCAACGAAAGGGCAATacaagagagacagggagggagagagagtgagaaagagcaagagagacagagagagtgagggagagagagcaagagggagggagagtgagtgagggagatagagaaaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417845 True 222 lncRNA 0.45 1 11745870 11746091

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 144338 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 232608 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 238586 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 326937 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 741229 10984720 ~ 11004641 (+)
phax phax coding downstream 57829 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 86818 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 173647 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 200910 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 310861 12056952 ~ 12093392 (+)
G367613 NA non-coding upstream 40657 11704911 ~ 11705213 (+)
G367565 NA non-coding upstream 48540 11697102 ~ 11697330 (+)
G367563 NA non-coding upstream 51231 11694420 ~ 11694639 (+)
G367562 LOC105030512 non-coding upstream 52733 11692906 ~ 11693137 (+)
G367558 NA non-coding upstream 60892 11684758 ~ 11684978 (+)
G367631 NA non-coding downstream 2383 11748474 ~ 11749971 (+)
G367630 NA non-coding downstream 4037 11750128 ~ 11752425 (+)
G367632 NA non-coding downstream 6554 11752645 ~ 11753051 (+)
G367633 NA non-coding downstream 7959 11754050 ~ 11754260 (+)
G367634 NA non-coding downstream 9284 11755375 ~ 11755807 (+)
G366973 NA other upstream 317160 11425642 ~ 11428710 (+)
G366748 NA other upstream 768718 10976682 ~ 10977152 (+)
G365197 NA other upstream 1896716 9848703 ~ 9849154 (+)
G364850 NA other upstream 2516639 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2899754 8775134 ~ 8849107 (+)
G367684 NA other downstream 132238 11878329 ~ 11880035 (+)
G368440 NA other downstream 1362605 13108696 ~ 13109134 (+)
G369763 NA other downstream 2019156 13765247 ~ 13769296 (+)
G370360 NA other downstream 2509712 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2575013 14321104 ~ 14325895 (+)

Expression


Co-expression Network