G367632


Basic Information

Item Value
gene id G367632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11752645 ~ 11753051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417852
GtataaaacacacagacacactagtcCAGAAGAGTGATCATGACTCCAATGATTTCCAATGACTTTGCTTCGGAACCTTGCTCACCATCTTGGTCCTCACTGCTTTCCTTGCTCTTGGGCGCCACATCCTGGAATCCCAGTCCAAACAGGTCCAGGTCGTCGCTCTTGATCGGGAGGACAGAGGGCTGGACCAGCTTCAGGTCCTCCAGTACAGCCGAAGGCTGCTTGGTaaaggggagacaggaagggagggGAGCGCGATAGAGAATGAGTAGGGGacaaagacagatggaaagacaggaaGGGAGGGGAGCGCGATAGAGAATGAGTAGGGGacaaagacagatggaaagacaggaaGGGAGGGGAGCGCGATAGAGAATGAGTAGGGGacaaagacagatgga

Function

NR:

description
rab-like protein 6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417852 True 407 lncRNA 0.53 1 11752645 11753051

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 151113 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 239383 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 245361 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 333712 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 748004 10984720 ~ 11004641 (+)
phax phax coding downstream 50869 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 79858 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 166687 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 193950 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 303901 12056952 ~ 12093392 (+)
G367630 NA non-coding upstream 220 11750128 ~ 11752425 (+)
G367631 NA non-coding upstream 2674 11748474 ~ 11749971 (+)
G367628 NA non-coding upstream 6554 11745870 ~ 11746091 (+)
G367613 NA non-coding upstream 47432 11704911 ~ 11705213 (+)
G367565 NA non-coding upstream 55315 11697102 ~ 11697330 (+)
G367633 NA non-coding downstream 999 11754050 ~ 11754260 (+)
G367634 NA non-coding downstream 2324 11755375 ~ 11755807 (+)
G367635 LOC106571245 non-coding downstream 3363 11756414 ~ 11756660 (+)
G367636 NA non-coding downstream 6169 11759220 ~ 11759448 (+)
G367637 NA non-coding downstream 6905 11759956 ~ 11760398 (+)
G366973 NA other upstream 323935 11425642 ~ 11428710 (+)
G366748 NA other upstream 775493 10976682 ~ 10977152 (+)
G365197 NA other upstream 1903491 9848703 ~ 9849154 (+)
G364850 NA other upstream 2523414 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2906529 8775134 ~ 8849107 (+)
G367684 NA other downstream 125278 11878329 ~ 11880035 (+)
G368440 NA other downstream 1355645 13108696 ~ 13109134 (+)
G369763 NA other downstream 2012196 13765247 ~ 13769296 (+)
G370360 NA other downstream 2502752 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2568053 14321104 ~ 14325895 (+)

Expression


Co-expression Network