Gene
RNA
| Item | Value |
|---|---|
| gene id | G367634 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 11755375 ~ 11755807 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109086375, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU417854 | True | 286 | lncRNA | 0.46 | 2 | 11755375 | 11755807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-agc-2 | NA | coding | upstream | 153843 | 11601460 ~ 11601532 (+) |
| LOC110523192 | plk2 | coding | upstream | 242113 | 11507689 ~ 11513262 (+) |
| LOC110524952 | NA | coding | upstream | 248091 | 11502643 ~ 11507284 (+) |
| LOC110523188 | pde4d | coding | upstream | 336442 | 11026101 ~ 11418933 (+) |
| depdc1b | depdc1b | coding | upstream | 750734 | 10984720 ~ 11004641 (+) |
| phax | phax | coding | downstream | 48113 | 11803920 ~ 11808076 (+) |
| lmnb1 | lmnb1 | coding | downstream | 77102 | 11832909 ~ 11854832 (+) |
| LOC110523202 | NA | coding | downstream | 163931 | 11919738 ~ 11922926 (+) |
| megf10 | megf10 | coding | downstream | 191194 | 11947001 ~ 12051563 (+) |
| prrc1 | prrc1 | coding | downstream | 301145 | 12056952 ~ 12093392 (+) |
| G367633 | NA | non-coding | upstream | 1115 | 11754050 ~ 11754260 (+) |
| G367632 | NA | non-coding | upstream | 2324 | 11752645 ~ 11753051 (+) |
| G367630 | NA | non-coding | upstream | 2950 | 11750128 ~ 11752425 (+) |
| G367631 | NA | non-coding | upstream | 5404 | 11748474 ~ 11749971 (+) |
| G367628 | NA | non-coding | upstream | 9284 | 11745870 ~ 11746091 (+) |
| G367635 | LOC106571245 | non-coding | downstream | 607 | 11756414 ~ 11756660 (+) |
| G367636 | NA | non-coding | downstream | 3413 | 11759220 ~ 11759448 (+) |
| G367637 | NA | non-coding | downstream | 4149 | 11759956 ~ 11760398 (+) |
| G367639 | NA | non-coding | downstream | 5905 | 11761712 ~ 11762017 (+) |
| G367640 | LOC106571245 | non-coding | downstream | 9958 | 11765765 ~ 11766235 (+) |
| G366973 | NA | other | upstream | 326665 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 778223 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 1906221 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 2526144 | 9228838 ~ 9229231 (+) |
| cdc42se2 | cdc42se2 | other | upstream | 2909259 | 8775134 ~ 8849107 (+) |
| G367684 | NA | other | downstream | 122522 | 11878329 ~ 11880035 (+) |
| G368440 | NA | other | downstream | 1352889 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 2009440 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2499996 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2565297 | 14321104 ~ 14325895 (+) |
