G367635 (LOC106571245)



Basic Information


Item Value
gene id G367635
gene name LOC106571245
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11756414 ~ 11756660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU417855
TTTTCTTGGGCTTCTCAAACTCCTCGTCCTCATAATCTGGTTCATCCATGACGAAGGAGAGCATCTGATCGTCCCCTGGAGCTTCTTGGTCTGAGTGGGAGgattcctcccctcccttcttcttGCCTGCCTGCATGGACTGCACCGGGGCTAGGGTCGGGTTCAGGAATGAGACGGGCTCGGACGACATCTTTAAGCCCGCTGGTTTCTTGGCTTCTCCGGTCTTGTTGAGAGTCTTCAAAGCGTT

Function


NR:

description
rab-like protein 6 isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU417855 True 247 lncRNA 0.54 1 11756414 11756660

Neighbor


gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 154882 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 243152 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 249130 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 337481 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 751773 10984720 ~ 11004641 (+)
phax phax coding downstream 47260 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 76249 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 163078 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 190341 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 300292 12056952 ~ 12093392 (+)
G367634 NA non-coding upstream 607 11755375 ~ 11755807 (+)
G367633 NA non-coding upstream 2154 11754050 ~ 11754260 (+)
G367632 NA non-coding upstream 3363 11752645 ~ 11753051 (+)
G367630 NA non-coding upstream 3989 11750128 ~ 11752425 (+)
G367631 NA non-coding upstream 6443 11748474 ~ 11749971 (+)
G367636 NA non-coding downstream 2560 11759220 ~ 11759448 (+)
G367637 NA non-coding downstream 3296 11759956 ~ 11760398 (+)
G367639 NA non-coding downstream 5052 11761712 ~ 11762017 (+)
G367640 LOC106571245 non-coding downstream 9105 11765765 ~ 11766235 (+)
G367641 NA non-coding downstream 9757 11766417 ~ 11766671 (+)
G366973 NA other upstream 327704 11425642 ~ 11428710 (+)
G366748 NA other upstream 779262 10976682 ~ 10977152 (+)
G365197 NA other upstream 1907260 9848703 ~ 9849154 (+)
G364850 NA other upstream 2527183 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2910298 8775134 ~ 8849107 (+)
G367684 NA other downstream 121669 11878329 ~ 11880035 (+)
G368440 NA other downstream 1352036 13108696 ~ 13109134 (+)
G369763 NA other downstream 2008587 13765247 ~ 13769296 (+)
G370360 NA other downstream 2499143 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2564444 14321104 ~ 14325895 (+)

Expression



Co-expression Network