G367640 (LOC106571245)


Basic Information

Item Value
gene id G367640
gene name LOC106571245
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11765765 ~ 11766235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417860
GCAGGAGCCTCAGAGGTGGCTGATCCAAAGAGGCGCGACATGAAGCCTCTCTTCTGGGCAGGGGGGGCCTGGGTGACACTTGGTGACTGGGGGGTCAGGACAGGTGTGGTTCCCCCATGGTGGAGCCCCTGAGGGGTTGGGGGCAGCGGCTGGGGGGCCGGGGGCTGCTGTGGGTAACCTGGACCCCTAGGGAGTGCAGTGTtctggagagggggacaggggttaaggttagggttggtgTAGGAGGGGGGACCCTGAACTGACCTGGGGATAGGGTTGGATATAGTTAGGGGCTGGGGTGGGAGAGGGGGTTGCTGGGGGgtgcaggggctgggacaggcccCAGGAGTAGAGGGCCCGCTCTGCGGGACGATGGGGGACTGGGAGCCTGAGGAGGGGCTCTGGCCGTTGGAAGGGCCCCCCGGGGAGCTGAAGCCAGCTTTGTTTCTGGCTTCCATCATCTCCAGGAAA

Function

NR:

description
rab-like protein 6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417860 True 471 lncRNA 0.66 1 11765765 11766235

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 164233 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 252503 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 258481 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 346832 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 761124 10984720 ~ 11004641 (+)
phax phax coding downstream 37685 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 66674 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 153503 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 180766 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 290717 12056952 ~ 12093392 (+)
G367639 NA non-coding upstream 3748 11761712 ~ 11762017 (+)
G367637 NA non-coding upstream 5367 11759956 ~ 11760398 (+)
G367636 NA non-coding upstream 6317 11759220 ~ 11759448 (+)
G367635 LOC106571245 non-coding upstream 9105 11756414 ~ 11756660 (+)
G367634 NA non-coding upstream 9958 11755375 ~ 11755807 (+)
G367641 NA non-coding downstream 182 11766417 ~ 11766671 (+)
G367644 NA non-coding downstream 2716 11768951 ~ 11769210 (+)
G367646 NA non-coding downstream 8475 11774710 ~ 11775006 (+)
G367649 NA non-coding downstream 11359 11777594 ~ 11777858 (+)
G367650 NA non-coding downstream 11727 11777962 ~ 11778302 (+)
G366973 NA other upstream 337055 11425642 ~ 11428710 (+)
G366748 NA other upstream 788613 10976682 ~ 10977152 (+)
G365197 NA other upstream 1916611 9848703 ~ 9849154 (+)
G364850 NA other upstream 2536534 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2919649 8775134 ~ 8849107 (+)
G367684 NA other downstream 112094 11878329 ~ 11880035 (+)
G368440 NA other downstream 1342461 13108696 ~ 13109134 (+)
G369763 NA other downstream 1999012 13765247 ~ 13769296 (+)
G370360 NA other downstream 2489568 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2554869 14321104 ~ 14325895 (+)

Expression


Co-expression Network