Gene
RNA
| Item | Value |
|---|---|
| gene id | G367641 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 11766417 ~ 11766671 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: rab-like protein 6 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU417861 | True | 255 | lncRNA | 0.50 | 1 | 11766417 | 11766671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-agc-2 | NA | coding | upstream | 164885 | 11601460 ~ 11601532 (+) |
| LOC110523192 | plk2 | coding | upstream | 253155 | 11507689 ~ 11513262 (+) |
| LOC110524952 | NA | coding | upstream | 259133 | 11502643 ~ 11507284 (+) |
| LOC110523188 | pde4d | coding | upstream | 347484 | 11026101 ~ 11418933 (+) |
| depdc1b | depdc1b | coding | upstream | 761776 | 10984720 ~ 11004641 (+) |
| phax | phax | coding | downstream | 37249 | 11803920 ~ 11808076 (+) |
| lmnb1 | lmnb1 | coding | downstream | 66238 | 11832909 ~ 11854832 (+) |
| LOC110523202 | NA | coding | downstream | 153067 | 11919738 ~ 11922926 (+) |
| megf10 | megf10 | coding | downstream | 180330 | 11947001 ~ 12051563 (+) |
| prrc1 | prrc1 | coding | downstream | 290281 | 12056952 ~ 12093392 (+) |
| G367640 | LOC106571245 | non-coding | upstream | 182 | 11765765 ~ 11766235 (+) |
| G367639 | NA | non-coding | upstream | 4400 | 11761712 ~ 11762017 (+) |
| G367637 | NA | non-coding | upstream | 6019 | 11759956 ~ 11760398 (+) |
| G367636 | NA | non-coding | upstream | 6969 | 11759220 ~ 11759448 (+) |
| G367635 | LOC106571245 | non-coding | upstream | 9757 | 11756414 ~ 11756660 (+) |
| G367644 | NA | non-coding | downstream | 2280 | 11768951 ~ 11769210 (+) |
| G367646 | NA | non-coding | downstream | 8039 | 11774710 ~ 11775006 (+) |
| G367649 | NA | non-coding | downstream | 10923 | 11777594 ~ 11777858 (+) |
| G367650 | NA | non-coding | downstream | 11291 | 11777962 ~ 11778302 (+) |
| G367653 | NA | non-coding | downstream | 18533 | 11785204 ~ 11785709 (+) |
| G366973 | NA | other | upstream | 337707 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 789265 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 1917263 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 2537186 | 9228838 ~ 9229231 (+) |
| cdc42se2 | cdc42se2 | other | upstream | 2920301 | 8775134 ~ 8849107 (+) |
| G367684 | NA | other | downstream | 111658 | 11878329 ~ 11880035 (+) |
| G368440 | NA | other | downstream | 1342025 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 1998576 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2489132 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2554433 | 14321104 ~ 14325895 (+) |
