G367646



Basic Information


Item Value
gene id G367646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11774710 ~ 11775006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU417866
GTATAGGGAGTCAGTATAGCCACATATTTTTtcaccactacatcactgatcAGGAATGTGTTTCATGAAATCTATTGACAAAGACTAACAAAGCTAGAGATTTCAATATGATTAGTTCAGGGGTTACAGCGCAACACTCCCTTAAAAGTGTCCCTTCGAGACAGATATTTCTGCATGTGAAGGACTAGGTGAGTGGTGTAGCACTCTGTAATAGATAGTGGAGGGTAGAGAGTTTTGCACACTTTTACCATTGGAGAagaaaacactgaagtgataCACTCCTGCAAAGCATTGACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU417866 True 297 lncRNA 0.40 1 11774710 11775006

Neighbor


gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 173178 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 261448 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 267426 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 355777 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 770069 10984720 ~ 11004641 (+)
phax phax coding downstream 28914 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 57903 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 144732 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 171995 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 281946 12056952 ~ 12093392 (+)
G367644 NA non-coding upstream 5500 11768951 ~ 11769210 (+)
G367641 NA non-coding upstream 8039 11766417 ~ 11766671 (+)
G367640 LOC106571245 non-coding upstream 8475 11765765 ~ 11766235 (+)
G367639 NA non-coding upstream 12693 11761712 ~ 11762017 (+)
G367637 NA non-coding upstream 14312 11759956 ~ 11760398 (+)
G367649 NA non-coding downstream 2588 11777594 ~ 11777858 (+)
G367650 NA non-coding downstream 2956 11777962 ~ 11778302 (+)
G367653 NA non-coding downstream 10198 11785204 ~ 11785709 (+)
G367654 aldh7a1 non-coding downstream 12249 11787255 ~ 11805366 (+)
G367663 LOC106571668 non-coding downstream 34276 11809282 ~ 11810342 (+)
G366973 NA other upstream 346000 11425642 ~ 11428710 (+)
G366748 NA other upstream 797558 10976682 ~ 10977152 (+)
G365197 NA other upstream 1925556 9848703 ~ 9849154 (+)
G364850 NA other upstream 2545479 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2928594 8775134 ~ 8849107 (+)
G367684 NA other downstream 103323 11878329 ~ 11880035 (+)
G368440 NA other downstream 1333690 13108696 ~ 13109134 (+)
G369763 NA other downstream 1990241 13765247 ~ 13769296 (+)
G370360 NA other downstream 2480797 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2546098 14321104 ~ 14325895 (+)

Expression



Co-expression Network