G367684


Basic Information

Item Value
gene id G367684
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11878329 ~ 11880035 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417909
tcggaagtttacatacacttaggtcattaaaactcgtttttcagccACCACACATTTCTAgttaataacaaactatagttttggcaagtcggttaggatatctaccttgtgcatgacacaagtaatttttccaacaattgtttacagacagattatttcacttataattcactgtatgacaattccagtgggtcagaagtttacatacactaagttgactgtgcatttaaacagcttggaaaatattttaaaaattatgtcatggctttagaagcttctgataggctaattgacataatttgagtcaattggaggtgtacctgtggatgtatgtcaaggcctaccttcaaactcagtgcctctttgcttgacatgggaaaatcaaaagaaatcagccaaaacctcagaaagaaaaattgtagacctccacaagtctagttcatccttgggagctatttccaaaagcctgaaggtaccacgttcatctgtacaaacaatagtacgcaagtataaacaccatgggaccatgcagccgtcatactgctcaggaaggagatgcattctgtctcctagagatgaacgtactttggtgtgaagatgctggaggaaacgggtacaaaagtatttatatccacactaaaacgagtcctatattgacataacctgaaaggccactcagcaaggaagaagccactgctccaaaaccgccataaaaaagccagactacggtttgcaactgcacatggggacaaagatcgtactttttggagaaatgtcctctggtcttatgaaacaaaatagaactgtttggccataatgaccatcgttatgtttggaggaaaaagggggaggcttgcaagctgaggaacaccatcccaaccgtgaagcacgggggtggcagcatcatgttgtgggggtgctttgctgcaggagggactggtgcacgttacaaaatagatggcatcatgatggaggaaaatgatgtggatatattgagcaacatctcaagacatcagttaaagcttggtcgcaaatgggtcttccaaatggacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaacgtattggagtggccatcacaaagccctgacctcaatcccatagaaaatgtgtgggcagaattgaaaaagcgtgtgcgagcaaggaggcctacaaacctgattcagtttcaccagctctgtcaggaggaatgggccaaaatgtacccaatttattgtgggacgcttgtggaaggctacccgaaacgtttgacccaagttaaacaatttaaaggcaatgctacaaaatactaattgagtgtatgtaaacttttgacccactgagaatgtgatgaaagaaataaaagctgaaataaatcattctctcaactattattctgacatttcacattctttaaataaagtggtgatcctaactgacttaaaatagggaattcttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttccgacttcaactgtacatataattttttatttaacctttatttaactaggcaagtcagttaagaacaaattcttattttaaatgacggcctaccccggccaaacctggatgacgctgggccactCGGGAGCCAGTAGGCCTTAACTGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417909 True 1707 TUCP 0.40 1 11878329 11880035

Neighbor

gene id symbol gene type direction distance location
lmnb1 lmnb1 coding upstream 23497 11832909 ~ 11854832 (+)
phax phax coding upstream 70253 11803920 ~ 11808076 (+)
trnaa-agc-2 NA coding upstream 276797 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 365067 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 371045 11502643 ~ 11507284 (+)
LOC110523202 NA coding downstream 39703 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 66966 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 176917 12056952 ~ 12093392 (+)
LOC110523206 ctxn3 coding downstream 233668 12113703 ~ 12134568 (+)
slc12a2 nkcc1a coding downstream 300733 12180768 ~ 12261242 (+)
G367670 NA non-coding upstream 60141 11817847 ~ 11818188 (+)
G367663 LOC106571668 non-coding upstream 67987 11809282 ~ 11810342 (+)
G367654 aldh7a1 non-coding upstream 72963 11787255 ~ 11805366 (+)
G367653 NA non-coding upstream 92620 11785204 ~ 11785709 (+)
G367650 NA non-coding upstream 100027 11777962 ~ 11778302 (+)
G367682 cssa01h5orf63 non-coding downstream 294 11880329 ~ 11883213 (+)
G367809 NA non-coding downstream 44903 11924938 ~ 11930233 (+)
G367840 NA non-coding downstream 113632 11993667 ~ 11994319 (+)
G367867 NA non-coding downstream 191378 12071413 ~ 12147440 (+)
G367933 NA non-coding downstream 296600 12176635 ~ 12176853 (+)
G366973 NA other upstream 449619 11425642 ~ 11428710 (+)
G366748 NA other upstream 901177 10976682 ~ 10977152 (+)
G365197 NA other upstream 2029175 9848703 ~ 9849154 (+)
G364850 NA other upstream 2649098 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 3032213 8775134 ~ 8849107 (+)
G368440 NA other downstream 1228661 13108696 ~ 13109134 (+)
G369763 NA other downstream 1885212 13765247 ~ 13769296 (+)
G370360 NA other downstream 2375768 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2441069 14321104 ~ 14325895 (+)
G370414 NA other downstream 2487637 14367672 ~ 14368161 (+)

Expression


Co-expression Network