G367934


Basic Information

Item Value
gene id G367934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12177834 ~ 12178295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418192
taagtgttcagtccctttgctatgagacacaacattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacctatggtcaattaaattgattggaagtgatttgaaaaggcacacaccagtctaaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtagagctccaagacaggattgtgtcgaggcacagatctggggaagggtaccaaaaaatgtctgcagcattgaaggtccccaagaacacagtggcctccatcattcttaaatggaagaagtttggaaccaccaagactcttcctagagctggccggccaaaccctcccctaacccagacgatgctggaccaattgtgcgccgccctatgggactcccgatcacggccgatgtgatacagccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418192 True 462 lncRNA 0.49 1 12177834 12178295

Neighbor

gene id symbol gene type direction distance location
LOC110523206 ctxn3 coding upstream 43266 12113703 ~ 12134568 (+)
prrc1 prrc1 coding upstream 84442 12056952 ~ 12093392 (+)
megf10 megf10 coding upstream 126271 11947001 ~ 12051563 (+)
LOC110523202 NA coding upstream 254908 11919738 ~ 11922926 (+)
lmnb1 lmnb1 coding upstream 323002 11832909 ~ 11854832 (+)
slc12a2 nkcc1a coding downstream 2473 12180768 ~ 12261242 (+)
LOC110523213 LOC106571108 coding downstream 138813 12317108 ~ 12321576 (+)
LOC110523216 LOC106570966 coding downstream 192615 12370910 ~ 12560586 (+)
nr5a1b LOC106570956 coding downstream 396284 12574579 ~ 12592217 (+)
psmb7 psmb7 coding downstream 448777 12627072 ~ 12647406 (+)
G367933 NA non-coding upstream 981 12176635 ~ 12176853 (+)
G367867 NA non-coding upstream 30394 12071413 ~ 12147440 (+)
G367840 NA non-coding upstream 183515 11993667 ~ 11994319 (+)
G367809 NA non-coding upstream 247601 11924938 ~ 11930233 (+)
G367682 cssa01h5orf63 non-coding upstream 294621 11880329 ~ 11883213 (+)
G367941 NA non-coding downstream 9741 12188036 ~ 12188273 (+)
G367944 NA non-coding downstream 14366 12192661 ~ 12192892 (+)
G367946 NA non-coding downstream 16477 12194772 ~ 12194983 (+)
G367948 NA non-coding downstream 19186 12197481 ~ 12197694 (+)
G367954 NA non-coding downstream 26792 12205087 ~ 12205389 (+)
G367684 NA other upstream 297799 11878329 ~ 11880035 (+)
G366973 NA other upstream 749124 11425642 ~ 11428710 (+)
G366748 NA other upstream 1200682 10976682 ~ 10977152 (+)
G365197 NA other upstream 2328680 9848703 ~ 9849154 (+)
G364850 NA other upstream 2948603 9228838 ~ 9229231 (+)
G368440 NA other downstream 930401 13108696 ~ 13109134 (+)
G369763 NA other downstream 1586952 13765247 ~ 13769296 (+)
G370360 NA other downstream 2077508 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2142809 14321104 ~ 14325895 (+)
G370414 NA other downstream 2189377 14367672 ~ 14368161 (+)

Expression


Co-expression Network