G367958


Basic Information

Item Value
gene id G367958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12209661 ~ 12209871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418218
atgtagccttgctactgtatgtagtctgtcttttttactgttgttttatttctttatttctgcactattggttagagcctgtaagtaagcatttcactgtaaggtctacctacacctgttgtattcggcgcacgtgacaaataaactttgatttgatgaccaaaagtatggggacatctgctcgtcgaacatcttattccaaaatcatggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418218 True 211 lncRNA 0.38 1 12209661 12209871

Neighbor

gene id symbol gene type direction distance location
LOC110523206 ctxn3 coding upstream 75093 12113703 ~ 12134568 (+)
prrc1 prrc1 coding upstream 116269 12056952 ~ 12093392 (+)
megf10 megf10 coding upstream 158098 11947001 ~ 12051563 (+)
LOC110523202 NA coding upstream 286735 11919738 ~ 11922926 (+)
lmnb1 lmnb1 coding upstream 354829 11832909 ~ 11854832 (+)
LOC110523213 LOC106571108 coding downstream 107237 12317108 ~ 12321576 (+)
LOC110523216 LOC106570966 coding downstream 161039 12370910 ~ 12560586 (+)
nr5a1b LOC106570956 coding downstream 364708 12574579 ~ 12592217 (+)
psmb7 psmb7 coding downstream 417201 12627072 ~ 12647406 (+)
LOC110523223 LOC106570883 coding downstream 592961 12802832 ~ 12978339 (+)
G367954 NA non-coding upstream 4272 12205087 ~ 12205389 (+)
G367948 NA non-coding upstream 11967 12197481 ~ 12197694 (+)
G367946 NA non-coding upstream 14678 12194772 ~ 12194983 (+)
G367944 NA non-coding upstream 16769 12192661 ~ 12192892 (+)
G367941 NA non-coding upstream 21388 12188036 ~ 12188273 (+)
G367960 NA non-coding downstream 2604 12212475 ~ 12212690 (+)
G367966 NA non-coding downstream 11990 12221861 ~ 12222093 (+)
G367969 NA non-coding downstream 15980 12225851 ~ 12226073 (+)
G367975 NA non-coding downstream 27176 12237047 ~ 12237309 (+)
G367977 NA non-coding downstream 33071 12242942 ~ 12243209 (+)
G367684 NA other upstream 329626 11878329 ~ 11880035 (+)
G366973 NA other upstream 780951 11425642 ~ 11428710 (+)
G366748 NA other upstream 1232509 10976682 ~ 10977152 (+)
G365197 NA other upstream 2360507 9848703 ~ 9849154 (+)
G364850 NA other upstream 2980430 9228838 ~ 9229231 (+)
G368440 NA other downstream 898825 13108696 ~ 13109134 (+)
G369763 NA other downstream 1555376 13765247 ~ 13769296 (+)
G370360 NA other downstream 2045932 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2111233 14321104 ~ 14325895 (+)
G370414 NA other downstream 2157801 14367672 ~ 14368161 (+)

Expression


Co-expression Network