G367966


Basic Information

Item Value
gene id G367966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12221861 ~ 12222093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418226
ATCAAACGtgtctactctggtcttggcacctgtgctctagccaacagcttgcagatacagtgcggCTAGGCTCTTGGGgtggctagtctacatgatgagtttGTTATGGATatgatatttttatttgtcaagcatcgatcatcacgTCTCCGGAGTTAGACCCTCAAGCATCGTTCATCACGTCTCTGGAGTTAGACCCTCAAGCATCGTTCATCACGTCTCTGGAGTTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418226 True 233 lncRNA 0.47 1 12221861 12222093

Neighbor

gene id symbol gene type direction distance location
LOC110523206 ctxn3 coding upstream 87293 12113703 ~ 12134568 (+)
prrc1 prrc1 coding upstream 128469 12056952 ~ 12093392 (+)
megf10 megf10 coding upstream 170298 11947001 ~ 12051563 (+)
LOC110523202 NA coding upstream 298935 11919738 ~ 11922926 (+)
lmnb1 lmnb1 coding upstream 367029 11832909 ~ 11854832 (+)
LOC110523213 LOC106571108 coding downstream 95015 12317108 ~ 12321576 (+)
LOC110523216 LOC106570966 coding downstream 148817 12370910 ~ 12560586 (+)
nr5a1b LOC106570956 coding downstream 352486 12574579 ~ 12592217 (+)
psmb7 psmb7 coding downstream 404979 12627072 ~ 12647406 (+)
LOC110523223 LOC106570883 coding downstream 580739 12802832 ~ 12978339 (+)
G367960 NA non-coding upstream 9171 12212475 ~ 12212690 (+)
G367958 NA non-coding upstream 11990 12209661 ~ 12209871 (+)
G367954 NA non-coding upstream 16472 12205087 ~ 12205389 (+)
G367948 NA non-coding upstream 24167 12197481 ~ 12197694 (+)
G367946 NA non-coding upstream 26878 12194772 ~ 12194983 (+)
G367969 NA non-coding downstream 3758 12225851 ~ 12226073 (+)
G367975 NA non-coding downstream 14954 12237047 ~ 12237309 (+)
G367977 NA non-coding downstream 20849 12242942 ~ 12243209 (+)
slc12a2 nkcc1a non-coding downstream 36253 12180768 ~ 12261242 (+)
G367937 NA non-coding downstream 43279 12265372 ~ 12266052 (+)
G367684 NA other upstream 341826 11878329 ~ 11880035 (+)
G366973 NA other upstream 793151 11425642 ~ 11428710 (+)
G366748 NA other upstream 1244709 10976682 ~ 10977152 (+)
G365197 NA other upstream 2372707 9848703 ~ 9849154 (+)
G364850 NA other upstream 2992630 9228838 ~ 9229231 (+)
G368440 NA other downstream 886603 13108696 ~ 13109134 (+)
G369763 NA other downstream 1543154 13765247 ~ 13769296 (+)
G370360 NA other downstream 2033710 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2099011 14321104 ~ 14325895 (+)
G370414 NA other downstream 2145579 14367672 ~ 14368161 (+)

Expression


Co-expression Network