G368699


Basic Information

Item Value
gene id G368699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12227434 ~ 12228341 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU419046
ctattattctactatgtagaaaatagtaaaaataaagaaaaactcttgaataagtaggtgtgtccaaacttttgactggtactgtacatttagcAACCACTTTTAGAAAGGCCCAAAACATCGGACCTCATTTTACTATAGAGCACTactaaaacacaaaacaaattgAAGTCTGATGAACAGAGAACATTAAACTCGAATGCCAATGGCATGCTTCAATCAGCAACGCGCAAAACAACTACCCTCGTCTGTGACTAAGGAGTGACCAATAGGCCATGATTGTACCGCGCCAATCCTTGGTTAAAATACTTGAAAGACCTCGGAAGGAGAAGACTCATTATTATGAATTTTGCATGAGCCATCCCTTAAAAATAGCGTGGGTTTTCAGTCCTCCATGCAAACAGCCCAAGAATAAAACATTGAAAAACATCATGAGAACCAAAGGCCAATTAGATTAGGCTTATTGCAGATGTTGAAACAATGTTCCAAACGGTAGGCTCGGTCAACATGGACTAAATGAATCAGCAAAACCTTCTGAGAAAAAGCAATTAAAAAATGCCTAAAAGAAAGTATTGAAAGAAACGTAACTGTCGATGACGACATGGGGAAAGATTCAGTGACTTACCGCAAGGAGCTCCACGACGGTTTCGGCAAAGCCCACCACGTACATGGCGACGGCCACAGCGTTGGCAAAGGCGAAGATCAAACCGATGGAGCCGCCAAACTCTGGGCCCAAACTTCTTGATATCAAATAGTACGCCCCTCCtgacaaacagacagaaagatgGACAGACAGTTGGCCAGATGGACATAGCATTTAAAACTGGGTTTCATTTAATGTCTCTCATAAAAAGGTTAAACACAAATCGTTTAATCAAATAACTGTCATATGTAGGCTAGCCTACTGC

Function

NR:

description
putative sodium-potassium-chloride cotransporter

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU419046 True 908 lncRNA 0.41 1 12227434 12228341

Neighbor

gene id symbol gene type direction distance location
LOC110523205 LOC106603399 coding downstream 107889 12116920 ~ 12119545 (-)
c5h5orf63 cssa01h5orf63 coding downstream 342859 11880306 ~ 11884575 (-)
marchf3 march3 coding downstream 349433 11856300 ~ 11878001 (-)
LOC110523198 LOC106571668 coding downstream 416417 11808333 ~ 11811017 (-)
aldh7a1 aldh7a1 coding downstream 433034 11787253 ~ 11794400 (-)
LOC110523212 LOC106571134 coding upstream 37652 12265993 ~ 12281595 (-)
LOC110523211 LOC106571125 coding upstream 55814 12284155 ~ 12289326 (-)
LOC110523214 NA coding upstream 66548 12294889 ~ 12297815 (-)
LOC110523209 LOC106571116 coding upstream 74487 12302828 ~ 12313482 (-)
LOC110523210 LOC106571086 coding upstream 96267 12324608 ~ 12340647 (-)
G368694 NA non-coding downstream 3641 12223578 ~ 12223793 (-)
G368693 NA non-coding downstream 4126 12223083 ~ 12223308 (-)
G368689 NA non-coding downstream 6843 12220297 ~ 12220591 (-)
G368688 NA non-coding downstream 7666 12219525 ~ 12219768 (-)
G368683 NA non-coding downstream 13855 12213290 ~ 12213579 (-)
G368701 NA non-coding upstream 310 12228651 ~ 12228857 (-)
G368702 NA non-coding upstream 645 12228986 ~ 12229435 (-)
G368720 NA non-coding upstream 5025 12233366 ~ 12233936 (-)
G368721 NA non-coding upstream 5755 12234096 ~ 12234391 (-)
G368722 NA non-coding upstream 6391 12234732 ~ 12237012 (-)
G368612 ctxn3 other downstream 90644 12134052 ~ 12136790 (-)
G365752 NA other downstream 3037336 9189669 ~ 9190098 (-)
G364754 NA other downstream 3176726 9047542 ~ 9099000 (-)
G364322 NA other downstream 3923251 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 5501454 6562531 ~ 6726634 (-)
G368921 NA other upstream 477225 12705566 ~ 12706092 (-)
G370333 NA other upstream 1978849 14207190 ~ 14208705 (-)
G370635 NA other upstream 2198997 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 2764787 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 2895134 15123475 ~ 15124789 (-)

Expression


Co-expression Network