Gene
RNA
| Item | Value |
|---|---|
| gene id | G367975 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 12237047 ~ 12237309 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU418235 | True | 263 | lncRNA | 0.43 | 1 | 12237047 | 12237309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523206 | ctxn3 | coding | upstream | 102479 | 12113703 ~ 12134568 (+) |
| prrc1 | prrc1 | coding | upstream | 143655 | 12056952 ~ 12093392 (+) |
| megf10 | megf10 | coding | upstream | 185484 | 11947001 ~ 12051563 (+) |
| LOC110523202 | NA | coding | upstream | 314121 | 11919738 ~ 11922926 (+) |
| lmnb1 | lmnb1 | coding | upstream | 382215 | 11832909 ~ 11854832 (+) |
| LOC110523213 | LOC106571108 | coding | downstream | 79799 | 12317108 ~ 12321576 (+) |
| LOC110523216 | LOC106570966 | coding | downstream | 133601 | 12370910 ~ 12560586 (+) |
| nr5a1b | LOC106570956 | coding | downstream | 337270 | 12574579 ~ 12592217 (+) |
| psmb7 | psmb7 | coding | downstream | 389763 | 12627072 ~ 12647406 (+) |
| LOC110523223 | LOC106570883 | coding | downstream | 565523 | 12802832 ~ 12978339 (+) |
| G367969 | NA | non-coding | upstream | 10974 | 12225851 ~ 12226073 (+) |
| G367966 | NA | non-coding | upstream | 14954 | 12221861 ~ 12222093 (+) |
| G367960 | NA | non-coding | upstream | 24357 | 12212475 ~ 12212690 (+) |
| G367958 | NA | non-coding | upstream | 27176 | 12209661 ~ 12209871 (+) |
| G367954 | NA | non-coding | upstream | 31658 | 12205087 ~ 12205389 (+) |
| G367977 | NA | non-coding | downstream | 5633 | 12242942 ~ 12243209 (+) |
| slc12a2 | nkcc1a | non-coding | downstream | 21037 | 12180768 ~ 12261242 (+) |
| G367937 | NA | non-coding | downstream | 28063 | 12265372 ~ 12266052 (+) |
| G367987 | LOC106571116 | non-coding | downstream | 46930 | 12284239 ~ 12343442 (+) |
| G368039 | NA | non-coding | downstream | 131469 | 12368778 ~ 12369051 (+) |
| G367684 | NA | other | upstream | 357012 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 808337 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 1259895 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 2387893 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 3007816 | 9228838 ~ 9229231 (+) |
| G368440 | NA | other | downstream | 871387 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 1527938 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2018494 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2083795 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 2130363 | 14367672 ~ 14368161 (+) |
