G368710


Basic Information

Item Value
gene id G368710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12241305 ~ 12244210 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU419082
ggggggggcgctacATCAGTTAACCCCTGCGCCAAGCAAAATGGAATGGATCCCAATGGAAAAGGCATCAGTGGTAACACCAAATGTTGGAGTCTCTCGGGGAAGGAACTTCCAACCCCGGCAATGGTTAAAAATCCTGGAGTCAGACAACTCCACTACTGGCTTAGTAGTGGACGAGCACTTTTGAGAGTTTTAAGACATTGGTTTAGATGTTTGACTCCTTTAAAAGCTACTGGAATAGTCTAAAGACAGATTTGTGTAACCAGTGTTTCTAGCCAGGACCCACTCTTTAGTCTTTAAAGGAGGGCAAAATCATTTTCTGCAACTATTTGAGAAACACTGGTTTACAACAACAGTTTAAATAACTTGGTCTAAATCACTTCATTCTGAAGAATTTTGGGGAGGTTCTCTGGTAGTGTCAAAATTGAGAAAGTAATGTATGCAAGTAATCTGAGAAAAATAATGAAGGTTCCGGCTTTAGAATTGCTTACTGCTAAGACGATTATAGATGTGACATTAATCTAGCGGTTTTCGTCACTTGGCACTGAAGGTTTACCATGTAGTACAAACATGTACCTTAGTTtaagtactcacacacacacacacacacacacacgtcagggtAACATTAGaaaacccacacaaacacacagcttcAGATGCTCTTCATTATTTACTGTGGGAGGGAATTGAGTGAATCGTGAGAAATGTCACTTCCTCTGTCACTGCACAGGATCAGGGACATGATATTCCCTATGGGAGGAAATAGAATTAAACTGAATTTCCCAGCCTGTCCATGCTGCACTGTGGGAACAGTTTCCCTGTTTGTTTGGTCATAGTTTGAGGAAAACACACATTTTAGTgaagcaatgtgtgtgtgtatttgggtttgtgtgcatgtgtgtgcgtacaCATACGTGTGTGTAAACaaggacagacacacactgtagtGAAGCCATCTGTGGGCTGTGGACTAACAAACTGGGCCCAGTGGGAAGGCTGGGGGTCACGGGGTCAGAGGCCACTTCCTCTCTGAGTCGGGCGACTTACAGGGCCGCCCACTCAGTGTATCCTAGTGACTGGCTGGCGAGATATAAGGGAGGCCTTTGAGAGATCTAGGGGGGATAGGGCGTGTGGCGATAAACTGCTTTCAGAATTCTTACATCCTGACCTCTTTCTCAAGCACGTTCACATTGTGATTTCACAAGAAACCTAGTTCACTTTGGCAGAGTATCAGACCCTCGAATGTCATCACAAAACGCCAAAGTTTCCATACATGCTGACGTGAAGTTATGGACATTTAGGTTGAGAAAGAGAGGTGAACCAACCTTACTGCTCCTGAAGAGCTAGTGTTTTCTCCCTGTCTCAGGACCTCAATTAGCTGAAGCAGGCATGTGCGCAAAACCACTGGTGTAGAATCTAAGTAAAAAGGCACTCGACACGCGTTCCTGTTTATGTGGGATACTTTAGAATGACGCCTGTAATGGGAAATATGATGAATTACTTTCCTGTATTTGAGCCTATAATTATCTGCTGAGACTAACTACCTTTGAGCTGCTTAACTGCCAGTATCAAATGTCTGCCAGTGTTGAGCCAAGGACACACTGACAATGTATCTGTGACACTGTGATTCTGTAGCAGCTGATGTTGTGACTTCTGTCGGTGCTGTGTGATTAATATCAGAGAAGACTCGTTAGACATTTTCTCTGCTTCAACAGGGAGGCGTCTCCCCGTTGCAACTTGTAATAAACCGGATCGATTTTTGATTGACATTATCAACGACTGCGCTCCTTTTGGTTCACCTGGAAATTCCCATTACAACTCCTGACCTTTCTGGATGGCTGGGCTGTTCTGGACGCTGGTGGCTTTGGACGAGGGCTTGGATGAGTCTCCGTCAGAGTCCTTCATGTCGATGGACACCACCACATCCTTCATCCCTGACGTCTTCTCCTGCGACGACAGCAGGTCATCTGCAGAACAACAAAGCTAAACTATTAGCCAACTGAAACTGACATGACCAGAACATCCTGCAAACATGGTGAACAAATGACCTGCGATGCTAAACTATTAGCATAATGCAAACAGAACATCCTGTTAACATTGAAAATAAATGACCTGCAAAGTAGCCCGGGCTGAGTGGAAAACAACTTGAGCAAGACTCCATTTTGTGTCCACTAAACACAGAAGTAGCCAGTAACTGTTAAAATGTTGGTAATTATCTTGATGATGGGGTTATTTGATGGGTGAAAGGCAAACAGTGTGTTAGAAAATGGCCGGCAAGCCATTTGGGCCAATTAAGGTGAATTTGGGTGGACTTTTGGCTGCGTAACAAGCCAAGTCAGATGACTGGACTGAGAAAGATTAATTCCACTAAAAAGTACACAGTTAGGAACTGCTCGGTAATGATACAGCCGCTTCCCACAAACAAGCAGGGACTTGGGCCTAACTTTTTCCTTTAATGCAATTATCTACATGTATTGACTAAGGTTTATCGGTGAAGGAATACGAATAACACGCCTACTCTTCAACCAAGACATCTTCACAATATGTAGAAACAAATGAGTTTCAAATACAGGGGAAAGAAAAAGGTCAAAACCTTCAGGTGAAGATGAATAAGAAGGTTAACAGAGAGTGACCGCGTGGGACCCAGGTGATCTTCTAGAAGCTGCAGTTGGACTGTGTTTGGAAAGCAAATCTAATAAAACATCCATTTGAGTTACTTGTTTAAttaaatctctctctccaaccGGCGAGAGCCACATTGAGTTAAAGAATCACACCTCATTATTGGTTGCTCTCGATTCCCTGTGTAGTCGCAGAACATTGACATGACGCAGCAAAGCACTGGTGCGAAATTCATTTTCTCAATattaaaataatattttatgAGGAAACCAATATGAGAC

Function

NR:

description
solute carrier family 12 member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU419082 True 2906 lncRNA 0.43 1 12241305 12244210

Neighbor

gene id symbol gene type direction distance location
LOC110523205 LOC106603399 coding downstream 121760 12116920 ~ 12119545 (-)
c5h5orf63 cssa01h5orf63 coding downstream 356730 11880306 ~ 11884575 (-)
marchf3 march3 coding downstream 363304 11856300 ~ 11878001 (-)
LOC110523198 LOC106571668 coding downstream 430288 11808333 ~ 11811017 (-)
aldh7a1 aldh7a1 coding downstream 446905 11787253 ~ 11794400 (-)
LOC110523212 LOC106571134 coding upstream 21783 12265993 ~ 12281595 (-)
LOC110523211 LOC106571125 coding upstream 39945 12284155 ~ 12289326 (-)
LOC110523214 NA coding upstream 50679 12294889 ~ 12297815 (-)
LOC110523209 LOC106571116 coding upstream 58618 12302828 ~ 12313482 (-)
LOC110523210 LOC106571086 coding upstream 80398 12324608 ~ 12340647 (-)
G368719 NA non-coding downstream 66 12240828 ~ 12241239 (-)
G368727 NA non-coding downstream 790 12240190 ~ 12240515 (-)
G368726 NA non-coding downstream 1184 12239910 ~ 12240121 (-)
G368725 NA non-coding downstream 1928 12238571 ~ 12239377 (-)
G368722 NA non-coding downstream 4293 12234732 ~ 12237012 (-)
G368715 NA non-coding upstream 2937 12247147 ~ 12247981 (-)
G368714 NA non-coding upstream 8169 12252379 ~ 12253433 (-)
G368704 NA non-coding upstream 13805 12258015 ~ 12261235 (-)
G368854 psmb7 non-coding upstream 401771 12645981 ~ 12647401 (-)
G368612 ctxn3 other downstream 104515 12134052 ~ 12136790 (-)
G365752 NA other downstream 3051207 9189669 ~ 9190098 (-)
G364754 NA other downstream 3190597 9047542 ~ 9099000 (-)
G364322 NA other downstream 3937122 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 5515325 6562531 ~ 6726634 (-)
G368921 NA other upstream 461356 12705566 ~ 12706092 (-)
G370333 NA other upstream 1962980 14207190 ~ 14208705 (-)
G370635 NA other upstream 2183128 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 2748918 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 2879265 15123475 ~ 15124789 (-)

Expression


Co-expression Network