G368039


Basic Information

Item Value
gene id G368039
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 12368778 ~ 12369051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418315
ATATAtataagcaataaggcatgagggggtgtggtatgtggccaatataccatggctacgggctgttcttaagcacgacgcaacacagagtgcctggatacagcccttatcggtggtatattggccatataccgcaaacccccgaggtgccttattgctattataaactggccaccaatgtaattagagcagtaaaaatacatgttttgtcattcctgtggtatatggtctgatatacctcGGCTATCAGccagtcagcattcagggctcgaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418315 True 274 lncRNA 0.46 1 12368778 12369051

Neighbor

gene id symbol gene type direction distance location
LOC110523213 LOC106571108 coding upstream 47202 12317108 ~ 12321576 (+)
slc12a2 nkcc1a coding upstream 107536 12180768 ~ 12261242 (+)
LOC110523206 ctxn3 coding upstream 234210 12113703 ~ 12134568 (+)
prrc1 prrc1 coding upstream 275386 12056952 ~ 12093392 (+)
megf10 megf10 coding upstream 317215 11947001 ~ 12051563 (+)
LOC110523216 LOC106570966 coding downstream 1859 12370910 ~ 12560586 (+)
nr5a1b LOC106570956 coding downstream 205528 12574579 ~ 12592217 (+)
psmb7 psmb7 coding downstream 258021 12627072 ~ 12647406 (+)
LOC110523223 LOC106570883 coding downstream 433781 12802832 ~ 12978339 (+)
ptpa ptpa coding downstream 720676 13089727 ~ 13107713 (+)
G367987 LOC106571116 non-coding upstream 25336 12284239 ~ 12343442 (+)
G367937 NA non-coding upstream 102726 12265372 ~ 12266052 (+)
G367977 NA non-coding upstream 125569 12242942 ~ 12243209 (+)
G367975 NA non-coding upstream 131469 12237047 ~ 12237309 (+)
G368124 NA non-coding downstream 142708 12511759 ~ 12512508 (+)
G368126 NA non-coding downstream 145964 12515015 ~ 12519164 (+)
G368216 NA non-coding downstream 311190 12680241 ~ 12683744 (+)
G368281 NA non-coding downstream 413189 12782240 ~ 12784546 (+)
G368355 NA non-coding downstream 535119 12904170 ~ 12904418 (+)
G367684 NA other upstream 488743 11878329 ~ 11880035 (+)
G366973 NA other upstream 940068 11425642 ~ 11428710 (+)
G366748 NA other upstream 1391626 10976682 ~ 10977152 (+)
G365197 NA other upstream 2519624 9848703 ~ 9849154 (+)
G364850 NA other upstream 3139547 9228838 ~ 9229231 (+)
G368440 NA other downstream 739645 13108696 ~ 13109134 (+)
G369763 NA other downstream 1396196 13765247 ~ 13769296 (+)
G370360 NA other downstream 1886752 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1952053 14321104 ~ 14325895 (+)
G370414 NA other downstream 1998621 14367672 ~ 14368161 (+)

Expression


Co-expression Network