Gene
RNA
| Item | Value |
|---|---|
| gene id | G368124 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 12511759 ~ 12512508 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU418402 | True | 464 | lncRNA | 0.46 | 2 | 12511759 | 12512508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523213 | LOC106571108 | coding | upstream | 190183 | 12317108 ~ 12321576 (+) |
| slc12a2 | nkcc1a | coding | upstream | 250517 | 12180768 ~ 12261242 (+) |
| LOC110523206 | ctxn3 | coding | upstream | 377191 | 12113703 ~ 12134568 (+) |
| prrc1 | prrc1 | coding | upstream | 418367 | 12056952 ~ 12093392 (+) |
| megf10 | megf10 | coding | upstream | 460196 | 11947001 ~ 12051563 (+) |
| nr5a1b | LOC106570956 | coding | downstream | 62071 | 12574579 ~ 12592217 (+) |
| psmb7 | psmb7 | coding | downstream | 114564 | 12627072 ~ 12647406 (+) |
| LOC110523223 | LOC106570883 | coding | downstream | 290324 | 12802832 ~ 12978339 (+) |
| ptpa | ptpa | coding | downstream | 577219 | 13089727 ~ 13107713 (+) |
| ntmt1 | ntmt1 | coding | downstream | 1027462 | 13539970 ~ 13543920 (+) |
| G368039 | NA | non-coding | upstream | 142708 | 12368778 ~ 12369051 (+) |
| G367987 | LOC106571116 | non-coding | upstream | 168317 | 12284239 ~ 12343442 (+) |
| G367937 | NA | non-coding | upstream | 245707 | 12265372 ~ 12266052 (+) |
| G367977 | NA | non-coding | upstream | 268550 | 12242942 ~ 12243209 (+) |
| G368126 | NA | non-coding | downstream | 2507 | 12515015 ~ 12519164 (+) |
| G368216 | NA | non-coding | downstream | 167733 | 12680241 ~ 12683744 (+) |
| G368281 | NA | non-coding | downstream | 269732 | 12782240 ~ 12784546 (+) |
| G368355 | NA | non-coding | downstream | 391662 | 12904170 ~ 12904418 (+) |
| G368356 | NA | non-coding | downstream | 392399 | 12904907 ~ 12905339 (+) |
| G367684 | NA | other | upstream | 631724 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 1083049 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 1534607 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 2662605 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 3282528 | 9228838 ~ 9229231 (+) |
| G368440 | NA | other | downstream | 596188 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 1252739 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 1743295 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 1808596 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 1855164 | 14367672 ~ 14368161 (+) |
