Gene
RNA
| Item | Value |
|---|---|
| gene id | G368921 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 12705566 ~ 12706092 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| keratin-associated protein 5-5-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU419308 | False | 257 | TUCP | 0.47 | 2 | 12705566 | 12706092 |
| TU419309 | True | 317 | TUCP | 0.48 | 3 | 12705566 | 12706092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523215 | znf79 | coding | downstream | 339963 | 12362672 ~ 12365603 (-) |
| LOC118964561 | LOC106571021 | coding | downstream | 345405 | 12353415 ~ 12360161 (-) |
| LOC110523208 | LOC106571116 | coding | downstream | 355763 | 12341006 ~ 12349803 (-) |
| LOC110523210 | LOC106571086 | coding | downstream | 364919 | 12324608 ~ 12340647 (-) |
| LOC110523209 | LOC106571116 | coding | downstream | 392084 | 12302828 ~ 12313482 (-) |
| LOC110523222 | LOC106570907 | coding | upstream | 76124 | 12782216 ~ 12795082 (-) |
| crb2a | LOC106570879 | coding | upstream | 278913 | 12985005 ~ 13026155 (-) |
| cdk9 | cdk9 | coding | upstream | 341826 | 13047918 ~ 13051933 (-) |
| crata | LOC106570862 | coding | upstream | 352795 | 13058887 ~ 13087209 (-) |
| ier5l | LOC106570852 | coding | upstream | 411897 | 13117989 ~ 13120296 (-) |
| G368910 | NA | non-coding | downstream | 21524 | 12677692 ~ 12684042 (-) |
| G368854 | psmb7 | non-coding | downstream | 58165 | 12645981 ~ 12647401 (-) |
| LOC110523214 | NA | non-coding | downstream | 409808 | 12294889 ~ 12297815 (-) |
| G368704 | NA | non-coding | downstream | 444331 | 12258015 ~ 12261235 (-) |
| G368714 | NA | non-coding | downstream | 452133 | 12252379 ~ 12253433 (-) |
| G368976 | NA | non-coding | upstream | 102675 | 12808767 ~ 12809226 (-) |
| G369075 | NA | non-coding | upstream | 211623 | 12917715 ~ 12918632 (-) |
| G369121 | NA | non-coding | upstream | 294735 | 13000827 ~ 13001212 (-) |
| G369132 | NA | non-coding | upstream | 315689 | 13021781 ~ 13023471 (-) |
| G369140 | NA | non-coding | upstream | 328437 | 13034529 ~ 13034800 (-) |
| G368612 | ctxn3 | other | downstream | 568776 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 3515468 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 3654858 | 9047542 ~ 9099000 (-) |
| G364322 | NA | other | downstream | 4401383 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 5979586 | 6562531 ~ 6726634 (-) |
| G370333 | NA | other | upstream | 1501098 | 14207190 ~ 14208705 (-) |
| G370635 | NA | other | upstream | 1721246 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 2287036 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 2417383 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 2990000 | 15693396 ~ 15707607 (-) |
