G369132


Basic Information

Item Value
gene id G369132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13021781 ~ 13023471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU419548
agcgattgttatttattactatattatttaacctttatttaactaggcaagtcagttaagaacaaattcatctttacaatgacggcctaccaaaaggcaaaagacctcctgcggggactggggctggaataaaacaaataaaaaatagaaataaataacatgtaaatataggacaaaacaaacatcatgacaagagagacaacactacactacacaaagagagacctaagacaacaacatagcaaggcagcaactaatgacaacaacatggtagcagcacaaaacatggtacaaacattattgggcacagacaacaacagaaagggcaagaaggtagagacaacaatacataacGCAAAgggttctgtcagatgtcagtgacagcctgtctttctttccccctctcaaCCTCCCTGgatcaggATCAGATCCATGGTAGAGCTGGCTGCTGTTCTGGACACTGTTGACTTTCTCCACTGTCTGTTTGAACTGTTTGAAGTGAGAAGACCCACTGGACAAAAGATGTTTGAATCAATGTGGTTTCTACGTCatttaaacaaaataattatATGTCATGccattgaatcaacgtggaaaactgattggattccTCAACTTAGGGGAATTTCATATTTGTCGCAGAACTTGTAAACTAAATCCAATGTCATGGTGAAAttgtttgttgatttcacattgaattcacgttagttgacaactcaaccaaatgaaaataaaaaacagacggtgaattgacatctgtgcccagtgggtggagagttgggagaaatggacaggagaagagagtagaggagggaaaagaggagagagaagaggacagggtagaggaggaacgaggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU419548 True 859 lncRNA 0.40 4 13021781 13023471

Neighbor

gene id symbol gene type direction distance location
LOC110523222 LOC106570907 coding downstream 226699 12782216 ~ 12795082 (-)
nek6 LOC106570951 coding downstream 287311 12647930 ~ 12734470 (-)
LOC110523215 znf79 coding downstream 656178 12362672 ~ 12365603 (-)
LOC118964561 LOC106571021 coding downstream 661620 12353415 ~ 12360161 (-)
LOC110523208 LOC106571116 coding downstream 671978 12341006 ~ 12349803 (-)
cdk9 cdk9 coding upstream 24447 13047918 ~ 13051933 (-)
crata LOC106570862 coding upstream 35416 13058887 ~ 13087209 (-)
ier5l LOC106570852 coding upstream 94518 13117989 ~ 13120296 (-)
ndor1 ndor1 coding upstream 520757 13544228 ~ 13558173 (-)
lrsam1 lrsam1 coding upstream 556873 13580344 ~ 13601020 (-)
G369121 NA non-coding downstream 20569 13000827 ~ 13001212 (-)
G369075 NA non-coding downstream 103149 12917715 ~ 12918632 (-)
G368976 NA non-coding downstream 212555 12808767 ~ 12809226 (-)
G368910 NA non-coding downstream 337739 12677692 ~ 12684042 (-)
G368854 psmb7 non-coding downstream 374380 12645981 ~ 12647401 (-)
G369140 NA non-coding upstream 11058 13034529 ~ 13034800 (-)
G369147 NA non-coding upstream 20293 13043764 ~ 13044287 (-)
G369113 NA non-coding upstream 29133 13052604 ~ 13052964 (-)
G369158 NA non-coding upstream 64009 13087480 ~ 13087705 (-)
G369160 NA non-coding upstream 65857 13089328 ~ 13089813 (-)
G368921 NA other downstream 315689 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 884991 12134052 ~ 12136790 (-)
G365752 NA other downstream 3831683 9189669 ~ 9190098 (-)
G364754 NA other downstream 3971073 9047542 ~ 9099000 (-)
G364322 NA other downstream 4717598 8303267 ~ 8304183 (-)
G370333 NA other upstream 1183719 14207190 ~ 14208705 (-)
G370635 NA other upstream 1403867 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 1969657 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 2100004 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 2672621 15693396 ~ 15707607 (-)

Expression


Co-expression Network