G368422


Basic Information

Item Value
gene id G368422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13052507 ~ 13052933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418751
tttctattgtatgtaaagaatccaaacagtacatctctccacaatagtgtaaaatcttcataaatgtgttcaattataaacctactgatgtcttgccacagttttcttacatgcatacaatgccaaaaaagatgcaacactgtttctgggtggtcattacaaaaggagcaatttgagttgctgttttccttaaacttcttcatatagtggttggcaggataatatttatgaacaattttaaaggaaacttccttaattttgttaacaagtaggtatgtgtgtggcaacatccaaacttttttccaacagatattatcaataaatccattccaataaggcatgacataaggttcaacatcctgctgaaacaaggttcgtatcactctgttgttgaatggaccaaaagagaaacaaatctttcctactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418751 True 427 lncRNA 0.34 1 13052507 13052933

Neighbor

gene id symbol gene type direction distance location
LOC110523223 LOC106570883 coding upstream 74168 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 405101 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 460290 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 491921 12370910 ~ 12560586 (+)
LOC110523213 LOC106571108 coding upstream 730931 12317108 ~ 12321576 (+)
ptpa ptpa coding downstream 36794 13089727 ~ 13107713 (+)
ntmt1 ntmt1 coding downstream 487037 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 504821 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 550276 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 551396 13604329 ~ 13604454 (+)
G368413 NA non-coding upstream 17509 13034772 ~ 13034998 (+)
G368387 NA non-coding upstream 81611 12965050 ~ 12970896 (+)
G368356 NA non-coding upstream 147168 12904907 ~ 12905339 (+)
G368355 NA non-coding upstream 148089 12904170 ~ 12904418 (+)
G368281 NA non-coding upstream 267961 12782240 ~ 12784546 (+)
G368424 NA non-coding downstream 2424 13055357 ~ 13055898 (+)
G368432 LOC106570862 non-coding downstream 7865 13060798 ~ 13065748 (+)
G368441 NA non-coding downstream 57120 13110053 ~ 13110260 (+)
G368445 NA non-coding downstream 62289 13115222 ~ 13115465 (+)
G368450 NA non-coding downstream 75727 13128660 ~ 13129188 (+)
G367684 NA other upstream 1172472 11878329 ~ 11880035 (+)
G366973 NA other upstream 1623797 11425642 ~ 11428710 (+)
G366748 NA other upstream 2075355 10976682 ~ 10977152 (+)
G365197 NA other upstream 3203353 9848703 ~ 9849154 (+)
G364850 NA other upstream 3823276 9228838 ~ 9229231 (+)
G368440 NA other downstream 55763 13108696 ~ 13109134 (+)
G369763 NA other downstream 712314 13765247 ~ 13769296 (+)
G370360 NA other downstream 1202870 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1268171 14321104 ~ 14325895 (+)
G370414 NA other downstream 1314739 14367672 ~ 14368161 (+)

Expression


Co-expression Network