G368424


Basic Information

Item Value
gene id G368424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13055357 ~ 13055898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418753
CtgtagggacttgcttccattcagccatgagcatAAGTGctgtcgggcactgatgttaggcaATTAGGCCTGGTTTGCAGTCAacattccaattaatcccaaaggtgttcaattgggttgaggtcagggctctgtgcaggccagtcaagttcttccacattgaTATCgagaaaccatttctgtatggacctcgctttgtgcatgggggcattgtcatgctgaaacaggaaaggaccttccccaaactgtttccacaatgTTGAAAgcatagaatcgtctagaatgtaattgtatgctgtagcgttaagatttccctccactggaattaaggggcctaacccgaaccatgaaaaacagcgccagatcattattcctcctctaccagACTTTActatgcactatgcattggggcaggtagcgttctcctggcatccgccaaacccagattcgtctgtcgtactgccagatgatgaagtgtgattcatcactccagagaatgcgtttccactgctccagagtccaatggcggtgagctttacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418753 True 542 lncRNA 0.48 1 13055357 13055898

Neighbor

gene id symbol gene type direction distance location
LOC110523223 LOC106570883 coding upstream 77018 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 407951 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 463140 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 494771 12370910 ~ 12560586 (+)
LOC110523213 LOC106571108 coding upstream 733781 12317108 ~ 12321576 (+)
ptpa ptpa coding downstream 33829 13089727 ~ 13107713 (+)
ntmt1 ntmt1 coding downstream 484072 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 501856 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 547311 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 548431 13604329 ~ 13604454 (+)
G368422 NA non-coding upstream 2424 13052507 ~ 13052933 (+)
G368413 NA non-coding upstream 20359 13034772 ~ 13034998 (+)
G368387 NA non-coding upstream 84461 12965050 ~ 12970896 (+)
G368356 NA non-coding upstream 150018 12904907 ~ 12905339 (+)
G368355 NA non-coding upstream 150939 12904170 ~ 12904418 (+)
G368432 LOC106570862 non-coding downstream 4900 13060798 ~ 13065748 (+)
G368441 NA non-coding downstream 54155 13110053 ~ 13110260 (+)
G368445 NA non-coding downstream 59324 13115222 ~ 13115465 (+)
G368450 NA non-coding downstream 72762 13128660 ~ 13129188 (+)
G368451 NA non-coding downstream 78458 13134356 ~ 13134770 (+)
G367684 NA other upstream 1175322 11878329 ~ 11880035 (+)
G366973 NA other upstream 1626647 11425642 ~ 11428710 (+)
G366748 NA other upstream 2078205 10976682 ~ 10977152 (+)
G365197 NA other upstream 3206203 9848703 ~ 9849154 (+)
G364850 NA other upstream 3826126 9228838 ~ 9229231 (+)
G368440 NA other downstream 52798 13108696 ~ 13109134 (+)
G369763 NA other downstream 709349 13765247 ~ 13769296 (+)
G370360 NA other downstream 1199905 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1265206 14321104 ~ 14325895 (+)
G370414 NA other downstream 1311774 14367672 ~ 14368161 (+)

Expression


Co-expression Network