G368432 (LOC106570862)


Basic Information

Item Value
gene id G368432
gene name LOC106570862
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13060798 ~ 13065748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418761
AGTGGAAAGATTGTAGTGGTTGGCCACAGCGTACGAGGTGTCCATGAAGATCTCAGGCATGGAGGTCAGGTCTTCGATGGCCTGCAGCTTCAGCCCCAGAAGGTGTCGGTCTATGGCCTGGCCATGGATCGCCATGTCAGTGTATGCCCGGTGGGCTTTCACAGCCTTCTCCAGTAGGGTCACTTTTTCTATCTTCTGTTTGGCTGGGTCGTCCATGGCCTTGACGAAATTAGCAGAGTCGATGGAGCAGGAGCGGATGGTGTCGGTGCGACCCAGCTTGAACATACGCAGAGACGCGCTCTCATAGGTGGCACAGCACCGCTGATacatcctgagagagagagagagcgatcccAGTTATATTGCATTGATACAGTTTAAGGCTAGTAGGAGTTAGGTTAGGGAATATTTTGCTCTCTGGAGATCCTACTCCTACAAAAGGAGGATATCCAGTAAGCCTATCTAAAAACATTGCCAtctagtggtctgaatattgacaTTCTTATCAACAATTCTCTATT

Function

NR:

description
carnitine O-acetyltransferase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418761 True 521 lncRNA 0.49 2 13060798 13065748

Neighbor

gene id symbol gene type direction distance location
LOC110523223 LOC106570883 coding upstream 82459 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 413392 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 468581 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 500212 12370910 ~ 12560586 (+)
LOC110523213 LOC106571108 coding upstream 739222 12317108 ~ 12321576 (+)
ptpa ptpa coding downstream 23979 13089727 ~ 13107713 (+)
ntmt1 ntmt1 coding downstream 474222 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 492006 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 537461 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 538581 13604329 ~ 13604454 (+)
G368424 NA non-coding upstream 4900 13055357 ~ 13055898 (+)
G368422 NA non-coding upstream 7865 13052507 ~ 13052933 (+)
G368413 NA non-coding upstream 25800 13034772 ~ 13034998 (+)
G368387 NA non-coding upstream 89902 12965050 ~ 12970896 (+)
G368356 NA non-coding upstream 155459 12904907 ~ 12905339 (+)
G368441 NA non-coding downstream 44305 13110053 ~ 13110260 (+)
G368445 NA non-coding downstream 49474 13115222 ~ 13115465 (+)
G368450 NA non-coding downstream 62912 13128660 ~ 13129188 (+)
G368451 NA non-coding downstream 68608 13134356 ~ 13134770 (+)
G368456 NA non-coding downstream 75065 13140813 ~ 13141299 (+)
G367684 NA other upstream 1180763 11878329 ~ 11880035 (+)
G366973 NA other upstream 1632088 11425642 ~ 11428710 (+)
G366748 NA other upstream 2083646 10976682 ~ 10977152 (+)
G365197 NA other upstream 3211644 9848703 ~ 9849154 (+)
G364850 NA other upstream 3831567 9228838 ~ 9229231 (+)
G368440 NA other downstream 42948 13108696 ~ 13109134 (+)
G369763 NA other downstream 699499 13765247 ~ 13769296 (+)
G370360 NA other downstream 1190055 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1255356 14321104 ~ 14325895 (+)
G370414 NA other downstream 1301924 14367672 ~ 14368161 (+)

Expression


Co-expression Network