G369160



Basic Information


Item Value
gene id G369160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13089328 ~ 13089813 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU419578
ggatgtataaatgtgaagcatccggttggcgtttccactcactaccaaatatggtgatgaaaGGAAGCCAATGGAGAAGATGGCGCGAGATTGAGTTTGGCTGACATTCTGCAaattttctcatcgatgaaacatttaatctcaatacagttttctgtttccaaaaatCGACTCAGACTAAGTTtagtagactttaccctttggcAAAGTTTTTTTTAATTGCTTTGTTTAGAAGGGGAAATTAATGCGCACGCGCACTTCACATAGTAGGCGTTCCATAACGGATATATGTAAATACCTGCCAGAACGCGcaaataggatctcgctagctcgtgcttggctctgcccacctccttgcttgttctccccactatgattaatttgctcccattggaaacgactCGTTGTTGTCTATCTTGGGGTAGTTCTACAAATCTTTGGTTGAAGTTTTGACAACATTAGTCACCTTTCAACTTTCACCCTAGT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU419578 True 486 lncRNA 0.41 1 13089328 13089813

Neighbor


gene id symbol gene type direction distance location
crata LOC106570862 coding downstream 2119 13058887 ~ 13087209 (-)
cdk9 cdk9 coding downstream 37395 13047918 ~ 13051933 (-)
crb2a LOC106570879 coding downstream 63173 12985005 ~ 13026155 (-)
LOC110523222 LOC106570907 coding downstream 294246 12782216 ~ 12795082 (-)
nek6 LOC106570951 coding downstream 354858 12647930 ~ 12734470 (-)
ier5l LOC106570852 coding upstream 28176 13117989 ~ 13120296 (-)
ndor1 ndor1 coding upstream 454415 13544228 ~ 13558173 (-)
lrsam1 lrsam1 coding upstream 490531 13580344 ~ 13601020 (-)
pole3 pole3 coding upstream 518769 13608582 ~ 13612833 (-)
zgc:55461 tubb4b coding upstream 676672 13766485 ~ 13770596 (-)
G369158 NA non-coding downstream 1623 13087480 ~ 13087705 (-)
G369113 NA non-coding downstream 36364 13052604 ~ 13052964 (-)
G369147 NA non-coding downstream 45041 13043764 ~ 13044287 (-)
G369140 NA non-coding downstream 54528 13034529 ~ 13034800 (-)
G369132 NA non-coding downstream 65857 13021781 ~ 13023471 (-)
G369172 NA non-coding upstream 19075 13108888 ~ 13109403 (-)
G369174 NA non-coding upstream 21460 13111273 ~ 13111488 (-)
G369176 NA non-coding upstream 23444 13113257 ~ 13113545 (-)
G369178 NA non-coding upstream 24923 13114736 ~ 13115029 (-)
G369182 NA non-coding upstream 30982 13120795 ~ 13121052 (-)
G368921 NA other downstream 383236 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 952538 12134052 ~ 12136790 (-)
G365752 NA other downstream 3899230 9189669 ~ 9190098 (-)
G364754 NA other downstream 4038620 9047542 ~ 9099000 (-)
G364322 NA other downstream 4785145 8303267 ~ 8304183 (-)
G370333 NA other upstream 1117377 14207190 ~ 14208705 (-)
G370635 NA other upstream 1337525 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 1903315 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 2033662 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 2606279 15693396 ~ 15707607 (-)

Expression



Co-expression Network