G368441


Basic Information

Item Value
gene id G368441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13110053 ~ 13110260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418770
aacaggcagtggctcaggtggttgttgtccttgatgatctttatggccttcctgtgacatctggtggTGTAGGTGTGCTGGAGGGCAGggagtttgcccccggtgatgccttgtgcagacctcactaccctctggagggccttacggttgtgggcggagcagctgccgtaccagacggggatacagcccgacaggatgctctcgattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418770 True 208 lncRNA 0.59 1 13110053 13110260

Neighbor

gene id symbol gene type direction distance location
ptpa ptpa coding upstream 2340 13089727 ~ 13107713 (+)
LOC110523223 LOC106570883 coding upstream 131714 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 462647 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 517836 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 549467 12370910 ~ 12560586 (+)
ntmt1 ntmt1 coding downstream 429710 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 447494 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 492949 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 494069 13604329 ~ 13604454 (+)
LOC118964767 NA coding downstream 494484 13604744 ~ 13604869 (+)
G368432 LOC106570862 non-coding upstream 44305 13060798 ~ 13065748 (+)
G368424 NA non-coding upstream 54155 13055357 ~ 13055898 (+)
G368422 NA non-coding upstream 57120 13052507 ~ 13052933 (+)
G368413 NA non-coding upstream 75055 13034772 ~ 13034998 (+)
G368387 NA non-coding upstream 139157 12965050 ~ 12970896 (+)
G368445 NA non-coding downstream 4962 13115222 ~ 13115465 (+)
G368450 NA non-coding downstream 18400 13128660 ~ 13129188 (+)
G368451 NA non-coding downstream 24096 13134356 ~ 13134770 (+)
G368456 NA non-coding downstream 30553 13140813 ~ 13141299 (+)
G368467 NA non-coding downstream 56561 13166821 ~ 13167155 (+)
G368440 NA other upstream 919 13108696 ~ 13109134 (+)
G367684 NA other upstream 1230018 11878329 ~ 11880035 (+)
G366973 NA other upstream 1681343 11425642 ~ 11428710 (+)
G366748 NA other upstream 2132901 10976682 ~ 10977152 (+)
G365197 NA other upstream 3260899 9848703 ~ 9849154 (+)
G369763 NA other downstream 654987 13765247 ~ 13769296 (+)
G370360 NA other downstream 1145543 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1210844 14321104 ~ 14325895 (+)
G370414 NA other downstream 1257412 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1694401 14798616 ~ 14805526 (+)

Expression


Co-expression Network