G368445


Basic Information

Item Value
gene id G368445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13115222 ~ 13115465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU418774
gtgtcatccagcatcttcacaaggtcctttgctgttgttctgggattttttttgcACCAAAGTCTGTTCATCtctgagacagaacgcgtctctacttgcgtactactgtttgtacagatgaacgtggtaccttcaggcgtttggaaattgctcccaaggatgagccagacttgtgaaggtctacaattgtttctgaggtcttggctgatttcttttgattttaccatgatgtcaagcaaagagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU418774 True 244 lncRNA 0.44 1 13115222 13115465

Neighbor

gene id symbol gene type direction distance location
ptpa ptpa coding upstream 7509 13089727 ~ 13107713 (+)
LOC110523223 LOC106570883 coding upstream 136883 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 467816 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 523005 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 554636 12370910 ~ 12560586 (+)
ntmt1 ntmt1 coding downstream 424505 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 442289 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 487744 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 488864 13604329 ~ 13604454 (+)
LOC118964767 NA coding downstream 489279 13604744 ~ 13604869 (+)
G368441 NA non-coding upstream 4962 13110053 ~ 13110260 (+)
G368432 LOC106570862 non-coding upstream 49474 13060798 ~ 13065748 (+)
G368424 NA non-coding upstream 59324 13055357 ~ 13055898 (+)
G368422 NA non-coding upstream 62289 13052507 ~ 13052933 (+)
G368413 NA non-coding upstream 80224 13034772 ~ 13034998 (+)
G368450 NA non-coding downstream 13195 13128660 ~ 13129188 (+)
G368451 NA non-coding downstream 18891 13134356 ~ 13134770 (+)
G368456 NA non-coding downstream 25348 13140813 ~ 13141299 (+)
G368467 NA non-coding downstream 51356 13166821 ~ 13167155 (+)
G369230 NA non-coding downstream 72458 13187923 ~ 13188126 (+)
G368440 NA other upstream 6088 13108696 ~ 13109134 (+)
G367684 NA other upstream 1235187 11878329 ~ 11880035 (+)
G366973 NA other upstream 1686512 11425642 ~ 11428710 (+)
G366748 NA other upstream 2138070 10976682 ~ 10977152 (+)
G365197 NA other upstream 3266068 9848703 ~ 9849154 (+)
G369763 NA other downstream 649782 13765247 ~ 13769296 (+)
G370360 NA other downstream 1140338 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1205639 14321104 ~ 14325895 (+)
G370414 NA other downstream 1252207 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1689196 14798616 ~ 14805526 (+)

Expression


Co-expression Network