G369202



Basic Information


Item Value
gene id G369202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13156305 ~ 13156631 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU419620
ctatcctcgtggggacaTTTGAGGATTCCAGGTACTGTAACAGTTCTCCTCATCATTGgaggaagagtagtcaagatcggaccaaaatgcagcgtggtatgtgtccatgttaatatttaataaatcaactgaacactgaataacaaaacaacagagagagtgaacgaaacagtcctgtaaggtgcaaaacacaaaacagaaaacaactacccacaaatcaagtgggataaacaggctacctaagtatgattctcaatcagagacaacgattgacagctgcctctgattgagaaccataccaggccaaacacatagaaaaccaaaact

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU419620 True 327 lncRNA 0.41 1 13156305 13156631

Neighbor


gene id symbol gene type direction distance location
ier5l LOC106570852 coding downstream 36009 13117989 ~ 13120296 (-)
crata LOC106570862 coding downstream 69096 13058887 ~ 13087209 (-)
cdk9 cdk9 coding downstream 104372 13047918 ~ 13051933 (-)
crb2a LOC106570879 coding downstream 130150 12985005 ~ 13026155 (-)
LOC110523222 LOC106570907 coding downstream 361223 12782216 ~ 12795082 (-)
ndor1 ndor1 coding upstream 387597 13544228 ~ 13558173 (-)
lrsam1 lrsam1 coding upstream 423713 13580344 ~ 13601020 (-)
pole3 pole3 coding upstream 451951 13608582 ~ 13612833 (-)
zgc:55461 tubb4b coding upstream 609854 13766485 ~ 13770596 (-)
glipr2 LOC106570345 coding upstream 625466 13782097 ~ 13797656 (-)
G369201 NA non-coding downstream 3511 13152590 ~ 13152794 (-)
G369198 NA non-coding downstream 10007 13146095 ~ 13146298 (-)
G369197 NA non-coding downstream 11417 13144607 ~ 13144888 (-)
G369193 NA non-coding downstream 19421 13136533 ~ 13136884 (-)
G369186 NA non-coding downstream 27218 13128786 ~ 13129087 (-)
G369204 NA non-coding upstream 2632 13159263 ~ 13159500 (-)
G369207 NA non-coding upstream 4211 13160842 ~ 13161174 (-)
G369224 NA non-coding upstream 25073 13181704 ~ 13181913 (-)
G369228 NA non-coding upstream 29087 13185718 ~ 13185957 (-)
G369238 NA non-coding upstream 42377 13199008 ~ 13199240 (-)
G368921 NA other downstream 450213 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 1019515 12134052 ~ 12136790 (-)
G365752 NA other downstream 3966207 9189669 ~ 9190098 (-)
G364754 NA other downstream 4105597 9047542 ~ 9099000 (-)
G364322 NA other downstream 4852122 8303267 ~ 8304183 (-)
G370333 NA other upstream 1050559 14207190 ~ 14208705 (-)
G370635 NA other upstream 1270707 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 1836497 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 1966844 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 2539461 15693396 ~ 15707607 (-)

Expression



Co-expression Network