Gene
RNA
| Item | Value |
|---|---|
| gene id | G369228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 13185718 ~ 13185957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU419646 | True | 240 | lncRNA | 0.38 | 1 | 13185718 | 13185957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ier5l | LOC106570852 | coding | downstream | 65422 | 13117989 ~ 13120296 (-) |
| crata | LOC106570862 | coding | downstream | 98509 | 13058887 ~ 13087209 (-) |
| cdk9 | cdk9 | coding | downstream | 133785 | 13047918 ~ 13051933 (-) |
| crb2a | LOC106570879 | coding | downstream | 159563 | 12985005 ~ 13026155 (-) |
| LOC110523222 | LOC106570907 | coding | downstream | 390636 | 12782216 ~ 12795082 (-) |
| ndor1 | ndor1 | coding | upstream | 358271 | 13544228 ~ 13558173 (-) |
| lrsam1 | lrsam1 | coding | upstream | 394387 | 13580344 ~ 13601020 (-) |
| pole3 | pole3 | coding | upstream | 422625 | 13608582 ~ 13612833 (-) |
| zgc:55461 | tubb4b | coding | upstream | 580528 | 13766485 ~ 13770596 (-) |
| glipr2 | LOC106570345 | coding | upstream | 596140 | 13782097 ~ 13797656 (-) |
| G369224 | NA | non-coding | downstream | 3805 | 13181704 ~ 13181913 (-) |
| G369207 | NA | non-coding | downstream | 24544 | 13160842 ~ 13161174 (-) |
| G369204 | NA | non-coding | downstream | 26218 | 13159263 ~ 13159500 (-) |
| G369202 | NA | non-coding | downstream | 29087 | 13156305 ~ 13156631 (-) |
| G369201 | NA | non-coding | downstream | 32924 | 13152590 ~ 13152794 (-) |
| G369238 | NA | non-coding | upstream | 13051 | 13199008 ~ 13199240 (-) |
| G369261 | NA | non-coding | upstream | 31646 | 13217603 ~ 13217864 (-) |
| G369266 | NA | non-coding | upstream | 35232 | 13221189 ~ 13221403 (-) |
| G369267 | NA | non-coding | upstream | 36827 | 13222784 ~ 13223218 (-) |
| G369269 | NA | non-coding | upstream | 44834 | 13230791 ~ 13231054 (-) |
| G368921 | NA | other | downstream | 479626 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 1048928 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 3995620 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 4135010 | 9047542 ~ 9099000 (-) |
| G364322 | NA | other | downstream | 4881535 | 8303267 ~ 8304183 (-) |
| G370333 | NA | other | upstream | 1021233 | 14207190 ~ 14208705 (-) |
| G370635 | NA | other | upstream | 1241381 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 1807171 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 1937518 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 2510135 | 15693396 ~ 15707607 (-) |
