G369230


Basic Information

Item Value
gene id G369230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13187923 ~ 13188126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU419648
GTAATGCATTATCTCAATTTTAATACGTCACttgtttgtatcaattgcaaagacattggcaactttgtatttgtaaTCAACATTGTTCTGAAGTGATCAGCAGTCACAAAGAAATGGATAAACAatgtgattctatgtttagcAGATATAAGGACAAAAAAGCATTCAATGACgcacttagctgttctacgagtggtctAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU419648 True 204 lncRNA 0.34 1 13187923 13188126

Neighbor

gene id symbol gene type direction distance location
ptpa ptpa coding upstream 80210 13089727 ~ 13107713 (+)
LOC110523223 LOC106570883 coding upstream 209584 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 540517 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 595706 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 627337 12370910 ~ 12560586 (+)
ntmt1 ntmt1 coding downstream 351844 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 369628 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 415083 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 416203 13604329 ~ 13604454 (+)
LOC118964767 NA coding downstream 416618 13604744 ~ 13604869 (+)
G368467 NA non-coding upstream 20768 13166821 ~ 13167155 (+)
G368456 NA non-coding upstream 46624 13140813 ~ 13141299 (+)
G368451 NA non-coding upstream 53153 13134356 ~ 13134770 (+)
G368450 NA non-coding upstream 58735 13128660 ~ 13129188 (+)
G368445 NA non-coding upstream 72458 13115222 ~ 13115465 (+)
G369233 NA non-coding downstream 2093 13190219 ~ 13190443 (+)
G369249 NA non-coding downstream 17613 13205739 ~ 13205944 (+)
G369262 NA non-coding downstream 30190 13218316 ~ 13218539 (+)
G369263 NA non-coding downstream 31336 13219462 ~ 13219768 (+)
G369264 NA non-coding downstream 32095 13220221 ~ 13220566 (+)
G368440 NA other upstream 78789 13108696 ~ 13109134 (+)
G367684 NA other upstream 1307888 11878329 ~ 11880035 (+)
G366973 NA other upstream 1759213 11425642 ~ 11428710 (+)
G366748 NA other upstream 2210771 10976682 ~ 10977152 (+)
G365197 NA other upstream 3338769 9848703 ~ 9849154 (+)
G369763 NA other downstream 577121 13765247 ~ 13769296 (+)
G370360 NA other downstream 1067677 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1132978 14321104 ~ 14325895 (+)
G370414 NA other downstream 1179546 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1616535 14798616 ~ 14805526 (+)

Expression


Co-expression Network