G369233


Basic Information

Item Value
gene id G369233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13190219 ~ 13190443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU419651
CGAGaatgagaaagcgagagagagccaTCTATAGGGAAAGACAGAAACAAAGATAGGAGAAtagaattaaaaaataataataatacaatacagaatataataaaaaaaatacatagacAATTGAACAGcaataaattaaattgatttaATTTATGTTTCAACAACTAATACCCTACAAATTCATTTGATGCTGGTTTCTCAGACACAGATTCCACCCAGTCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU419651 True 225 lncRNA 0.30 1 13190219 13190443

Neighbor

gene id symbol gene type direction distance location
ptpa ptpa coding upstream 82506 13089727 ~ 13107713 (+)
LOC110523223 LOC106570883 coding upstream 211880 12802832 ~ 12978339 (+)
psmb7 psmb7 coding upstream 542813 12627072 ~ 12647406 (+)
nr5a1b LOC106570956 coding upstream 598002 12574579 ~ 12592217 (+)
LOC110523216 LOC106570966 coding upstream 629633 12370910 ~ 12560586 (+)
ntmt1 ntmt1 coding downstream 349527 13539970 ~ 13543920 (+)
fkbp15a fkbp15 coding downstream 367311 13557754 ~ 13582939 (+)
rpl12 rpl12 coding downstream 412766 13603209 ~ 13606051 (+)
LOC118964769 NA coding downstream 413886 13604329 ~ 13604454 (+)
LOC118964767 NA coding downstream 414301 13604744 ~ 13604869 (+)
G369230 NA non-coding upstream 2093 13187923 ~ 13188126 (+)
G368467 NA non-coding upstream 23064 13166821 ~ 13167155 (+)
G368456 NA non-coding upstream 48920 13140813 ~ 13141299 (+)
G368451 NA non-coding upstream 55449 13134356 ~ 13134770 (+)
G368450 NA non-coding upstream 61031 13128660 ~ 13129188 (+)
G369249 NA non-coding downstream 15296 13205739 ~ 13205944 (+)
G369262 NA non-coding downstream 27873 13218316 ~ 13218539 (+)
G369263 NA non-coding downstream 29019 13219462 ~ 13219768 (+)
G369264 NA non-coding downstream 29778 13220221 ~ 13220566 (+)
G369268 NA non-coding downstream 33894 13224337 ~ 13224541 (+)
G368440 NA other upstream 81085 13108696 ~ 13109134 (+)
G367684 NA other upstream 1310184 11878329 ~ 11880035 (+)
G366973 NA other upstream 1761509 11425642 ~ 11428710 (+)
G366748 NA other upstream 2213067 10976682 ~ 10977152 (+)
G365197 NA other upstream 3341065 9848703 ~ 9849154 (+)
G369763 NA other downstream 574804 13765247 ~ 13769296 (+)
G370360 NA other downstream 1065360 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 1130661 14321104 ~ 14325895 (+)
G370414 NA other downstream 1177229 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1614218 14798616 ~ 14805526 (+)

Expression


Co-expression Network