G369479



Basic Information


Item Value
gene id G369479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13368697 ~ 13374869 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU419943
atcagcttcagtaggatgaagacagctttagaagactgtaatcagcttccatgagatgaagacagctttagaagactgtaatcagcttcagtgggatgaagacagctttagaagactgtaatcagcttcagtggtatgaagacatctttagaagactgtaatcagcttcagtgggatgaagacagctataaaagactgtaatcagcttcagtgggatgaagacagctttagaagactgtaatcagcttcagtaggatgaagacagctttagacgactgtaatcagcttcagtgggatgaagacagctttagaagactgtaatcagcttcagtgggatgaagcgagctttagaagactgtaatcagcttcagtgggatgaagacagttttagaagactgtaatcagcttcagtgggaggAAGACaactttagaagactgtaatcagcttcagtgggattaagacagttttagaagaatgtaatcagcttcagtgggatgaagacagctagagaagactgtaatcagcttcagtgggatgaagacagttttagaagactgtaataattttcagtgggatgaagacagctttagaagactgtaatcagcttcagtgggatgaagacagctttagaagactgtaatcagcttcagtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU419943 True 653 lncRNA 0.41 2 13368697 13374869

Neighbor


gene id symbol gene type direction distance location
ier5l LOC106570852 coding downstream 248401 13117989 ~ 13120296 (-)
crata LOC106570862 coding downstream 281488 13058887 ~ 13087209 (-)
cdk9 cdk9 coding downstream 316764 13047918 ~ 13051933 (-)
crb2a LOC106570879 coding downstream 342542 12985005 ~ 13026155 (-)
LOC110523222 LOC106570907 coding downstream 573615 12782216 ~ 12795082 (-)
ndor1 ndor1 coding upstream 169359 13544228 ~ 13558173 (-)
lrsam1 lrsam1 coding upstream 205475 13580344 ~ 13601020 (-)
pole3 pole3 coding upstream 233713 13608582 ~ 13612833 (-)
zgc:55461 tubb4b coding upstream 391616 13766485 ~ 13770596 (-)
glipr2 LOC106570345 coding upstream 407228 13782097 ~ 13797656 (-)
G369321 NA non-coding downstream 94538 13273870 ~ 13274159 (-)
G369318 NA non-coding downstream 98147 13270165 ~ 13270550 (-)
G369307 NA non-coding downstream 103099 13265334 ~ 13265598 (-)
G369281 NA non-coding downstream 128300 13240170 ~ 13240397 (-)
G369270 NA non-coding downstream 136609 13231702 ~ 13232088 (-)
G369447 NA non-coding upstream 7098 13381967 ~ 13440360 (-)
G369522 NA non-coding upstream 102742 13477611 ~ 13480681 (-)
G369540 NA non-coding upstream 135583 13510452 ~ 13510679 (-)
G369546 NA non-coding upstream 139242 13514111 ~ 13514310 (-)
G369649 NA non-coding upstream 194454 13569323 ~ 13569573 (-)
G368921 NA other downstream 662605 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 1231907 12134052 ~ 12136790 (-)
G365752 NA other downstream 4178599 9189669 ~ 9190098 (-)
G364754 NA other downstream 4317989 9047542 ~ 9099000 (-)
G364322 NA other downstream 5064514 8303267 ~ 8304183 (-)
G370333 NA other upstream 832321 14207190 ~ 14208705 (-)
G370635 NA other upstream 1052469 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 1618259 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 1748606 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 2321223 15693396 ~ 15707607 (-)

Expression



Co-expression Network