Gene
RNA
| Item | Value |
|---|---|
| gene id | G369641 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 13605544 ~ 13606052 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 60S ribosomal protein L12 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU420122 | True | 270 | lncRNA | 0.48 | 2 | 13605544 | 13606052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrsam1 | lrsam1 | coding | downstream | 4524 | 13580344 ~ 13601020 (-) |
| ndor1 | ndor1 | coding | downstream | 47371 | 13544228 ~ 13558173 (-) |
| ier5l | LOC106570852 | coding | downstream | 485248 | 13117989 ~ 13120296 (-) |
| crata | LOC106570862 | coding | downstream | 518335 | 13058887 ~ 13087209 (-) |
| cdk9 | cdk9 | coding | downstream | 553611 | 13047918 ~ 13051933 (-) |
| pole3 | pole3 | coding | upstream | 2530 | 13608582 ~ 13612833 (-) |
| zgc:55461 | tubb4b | coding | upstream | 160433 | 13766485 ~ 13770596 (-) |
| glipr2 | LOC106570345 | coding | upstream | 176045 | 13782097 ~ 13797656 (-) |
| si:dkey-220k22.1 | LOC106570374 | coding | upstream | 286884 | 13892936 ~ 13973261 (-) |
| LOC110523244 | LOC106570388 | coding | upstream | 367246 | 13973298 ~ 13982903 (-) |
| G369653 | NA | non-coding | downstream | 28049 | 13577194 ~ 13577495 (-) |
| G369643 | NA | non-coding | downstream | 30262 | 13575012 ~ 13575282 (-) |
| G369651 | NA | non-coding | downstream | 34121 | 13571204 ~ 13571423 (-) |
| G369649 | NA | non-coding | downstream | 35971 | 13569323 ~ 13569573 (-) |
| G369546 | NA | non-coding | downstream | 91234 | 13514111 ~ 13514310 (-) |
| G369660 | NA | non-coding | upstream | 9224 | 13615276 ~ 13615507 (-) |
| G369662 | NA | non-coding | upstream | 10583 | 13616635 ~ 13616946 (-) |
| G369685 | LOC106570334 | non-coding | upstream | 44053 | 13650105 ~ 13651795 (-) |
| G369691 | NA | non-coding | upstream | 53712 | 13659764 ~ 13660122 (-) |
| G370031 | NA | non-coding | upstream | 78104 | 13684156 ~ 13685111 (-) |
| G368921 | NA | other | downstream | 899452 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 1468754 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 4415446 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 4554836 | 9047542 ~ 9099000 (-) |
| G364322 | NA | other | downstream | 5301361 | 8303267 ~ 8304183 (-) |
| G370333 | NA | other | upstream | 601138 | 14207190 ~ 14208705 (-) |
| G370635 | NA | other | upstream | 821286 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 1387076 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 1517423 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 2090040 | 15693396 ~ 15707607 (-) |
