Gene
RNA
| Item | Value |
|---|---|
| gene id | G369619 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 13659762 ~ 13660150 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU420096 | True | 216 | lncRNA | 0.38 | 2 | 13659762 | 13660150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccn1l1 | LOC106570334 | coding | upstream | 7927 | 13647485 ~ 13651835 (+) |
| LOC118964562 | NA | coding | upstream | 15634 | 13613034 ~ 13644128 (+) |
| rpl12 | rpl12 | coding | upstream | 53711 | 13603209 ~ 13606051 (+) |
| LOC118964768 | NA | coding | upstream | 53941 | 13605700 ~ 13605821 (+) |
| LOC118964766 | NA | coding | upstream | 54313 | 13605324 ~ 13605449 (+) |
| lmo4a | lmo41 | coding | downstream | 8023 | 13668173 ~ 13685140 (+) |
| LOC110523240 | fpgs | coding | downstream | 146635 | 13806785 ~ 13818030 (+) |
| gpr107 | LOC106570369 | coding | downstream | 158177 | 13818327 ~ 13850807 (+) |
| ncs1a | ncs1 | coding | downstream | 200302 | 13860452 ~ 13882141 (+) |
| arpc5l | arpc5l | coding | downstream | 326545 | 13986695 ~ 13990227 (+) |
| G369584 | lrsam1 | non-coding | upstream | 65115 | 13590579 ~ 13594647 (+) |
| fkbp15a | fkbp15 | non-coding | upstream | 76823 | 13557754 ~ 13582939 (+) |
| G369580 | NA | non-coding | upstream | 90252 | 13569180 ~ 13569510 (+) |
| G369551 | NA | non-coding | upstream | 138834 | 13520714 ~ 13520928 (+) |
| G369550 | NA | non-coding | upstream | 142836 | 13516723 ~ 13516926 (+) |
| G369719 | NA | non-coding | downstream | 40254 | 13700404 ~ 13700664 (+) |
| G369720 | NA | non-coding | downstream | 42766 | 13702916 ~ 13703134 (+) |
| G369721 | NA | non-coding | downstream | 43021 | 13703171 ~ 13703492 (+) |
| G369722 | NA | non-coding | downstream | 43398 | 13703548 ~ 13703868 (+) |
| G369730 | NA | non-coding | downstream | 52989 | 13713139 ~ 13713423 (+) |
| G368440 | NA | other | upstream | 550628 | 13108696 ~ 13109134 (+) |
| G367684 | NA | other | upstream | 1779727 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 2231052 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 2682610 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 3810608 | 9848703 ~ 9849154 (+) |
| G369763 | NA | other | downstream | 105097 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 595653 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 660954 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 707522 | 14367672 ~ 14368161 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 1144511 | 14798616 ~ 14805526 (+) |
