G369730


Basic Information

Item Value
gene id G369730
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13713139 ~ 13713423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420223
gcactttattgcatgacataagtatttgatacataagaaaagcagaacttaatatttggtacacaaacctttgtttgcaattacagagatcatacgtttcctgtagttcttgaccaggtttgcacacactgcagcaggaattttgtcccactcctccatacagaccttctccagatccttcaggtttcggggctgtcgctgggcaatacggactttcagctccctccaaagattttcttttgggttcaggtctggagactggctaggccactccaggaccttgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU420223 True 285 lncRNA 0.45 1 13713139 13713423

Neighbor

gene id symbol gene type direction distance location
lmo4a lmo41 coding upstream 27999 13668173 ~ 13685140 (+)
ccn1l1 LOC106570334 coding upstream 61304 13647485 ~ 13651835 (+)
LOC118964562 NA coding upstream 69011 13613034 ~ 13644128 (+)
LOC118964768 NA coding upstream 107318 13605700 ~ 13605821 (+)
LOC118964766 NA coding upstream 107690 13605324 ~ 13605449 (+)
LOC110523240 fpgs coding downstream 93362 13806785 ~ 13818030 (+)
gpr107 LOC106570369 coding downstream 104904 13818327 ~ 13850807 (+)
ncs1a ncs1 coding downstream 147029 13860452 ~ 13882141 (+)
arpc5l arpc5l coding downstream 273272 13986695 ~ 13990227 (+)
LOC110523252 LOC106570453 coding downstream 415136 14128559 ~ 14142466 (+)
G369722 NA non-coding upstream 9271 13703548 ~ 13703868 (+)
G369721 NA non-coding upstream 9647 13703171 ~ 13703492 (+)
G369720 NA non-coding upstream 10005 13702916 ~ 13703134 (+)
G369719 NA non-coding upstream 12475 13700404 ~ 13700664 (+)
G369619 NA non-coding upstream 52989 13659762 ~ 13660150 (+)
G369734 NA non-coding downstream 2361 13715784 ~ 13716027 (+)
G369741 NA non-coding downstream 8660 13722083 ~ 13722442 (+)
G369742 NA non-coding downstream 10263 13723686 ~ 13723950 (+)
G369770 LOC106570345 non-coding downstream 68846 13782269 ~ 13797757 (+)
G369785 NA non-coding downstream 86932 13800355 ~ 13854169 (+)
G368440 NA other upstream 604005 13108696 ~ 13109134 (+)
G367684 NA other upstream 1833104 11878329 ~ 11880035 (+)
G366973 NA other upstream 2284429 11425642 ~ 11428710 (+)
G366748 NA other upstream 2735987 10976682 ~ 10977152 (+)
G365197 NA other upstream 3863985 9848703 ~ 9849154 (+)
G369763 NA other downstream 51824 13765247 ~ 13769296 (+)
G370360 NA other downstream 542380 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 607681 14321104 ~ 14325895 (+)
G370414 NA other downstream 654249 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1091238 14798616 ~ 14805526 (+)

Expression


Co-expression Network