G369742


Basic Information

Item Value
gene id G369742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13723686 ~ 13723950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420235
atacaggatgctttcaattgtgcatctgtaaaagtttgtgagggtcttaggggccaagccaaatttcttcagcctcctgaggttgaagaggtgctgttgcaccttcttcaccacactgcctgtgcgggtggaccatttcagattgtcagtgatgtgtactccgaggaacttgaagcttttcaccttctaaTCTGcggtcccattgatgtggatagtggCGTGCTCCCTCTGCCGTCTACTGAAGTCCACGTGTCACGTTCCACTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU420235 True 265 lncRNA 0.50 1 13723686 13723950

Neighbor

gene id symbol gene type direction distance location
lmo4a lmo41 coding upstream 38546 13668173 ~ 13685140 (+)
ccn1l1 LOC106570334 coding upstream 71851 13647485 ~ 13651835 (+)
LOC118964562 NA coding upstream 79558 13613034 ~ 13644128 (+)
LOC118964768 NA coding upstream 117865 13605700 ~ 13605821 (+)
LOC118964766 NA coding upstream 118237 13605324 ~ 13605449 (+)
LOC110523240 fpgs coding downstream 82835 13806785 ~ 13818030 (+)
gpr107 LOC106570369 coding downstream 94377 13818327 ~ 13850807 (+)
ncs1a ncs1 coding downstream 136502 13860452 ~ 13882141 (+)
arpc5l arpc5l coding downstream 262745 13986695 ~ 13990227 (+)
LOC110523252 LOC106570453 coding downstream 404609 14128559 ~ 14142466 (+)
G369741 NA non-coding upstream 1244 13722083 ~ 13722442 (+)
G369734 NA non-coding upstream 7659 13715784 ~ 13716027 (+)
G369730 NA non-coding upstream 10263 13713139 ~ 13713423 (+)
G369722 NA non-coding upstream 19818 13703548 ~ 13703868 (+)
G369721 NA non-coding upstream 20194 13703171 ~ 13703492 (+)
G369770 LOC106570345 non-coding downstream 58319 13782269 ~ 13797757 (+)
G369785 NA non-coding downstream 76405 13800355 ~ 13854169 (+)
G369805 NA non-coding downstream 132614 13856564 ~ 13856861 (+)
G369820 NA non-coding downstream 160326 13884276 ~ 13886502 (+)
G369819 NA non-coding downstream 162853 13886803 ~ 13892285 (+)
G368440 NA other upstream 614552 13108696 ~ 13109134 (+)
G367684 NA other upstream 1843651 11878329 ~ 11880035 (+)
G366973 NA other upstream 2294976 11425642 ~ 11428710 (+)
G366748 NA other upstream 2746534 10976682 ~ 10977152 (+)
G365197 NA other upstream 3874532 9848703 ~ 9849154 (+)
G369763 NA other downstream 41297 13765247 ~ 13769296 (+)
G370360 NA other downstream 531853 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 597154 14321104 ~ 14325895 (+)
G370414 NA other downstream 643722 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1080711 14798616 ~ 14805526 (+)

Expression


Co-expression Network