Gene
RNA
| Item | Value |
|---|---|
| gene id | G369785 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 13800355 ~ 13854169 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU420290 | True | 232 | lncRNA | 0.33 | 2 | 13800355 | 13854169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lmo4a | lmo41 | coding | upstream | 115215 | 13668173 ~ 13685140 (+) |
| ccn1l1 | LOC106570334 | coding | upstream | 148520 | 13647485 ~ 13651835 (+) |
| LOC118964562 | NA | coding | upstream | 156227 | 13613034 ~ 13644128 (+) |
| LOC118964768 | NA | coding | upstream | 194534 | 13605700 ~ 13605821 (+) |
| LOC118964766 | NA | coding | upstream | 194906 | 13605324 ~ 13605449 (+) |
| ncs1a | ncs1 | coding | downstream | 6283 | 13860452 ~ 13882141 (+) |
| arpc5l | arpc5l | coding | downstream | 132526 | 13986695 ~ 13990227 (+) |
| LOC110523252 | LOC106570453 | coding | downstream | 274390 | 14128559 ~ 14142466 (+) |
| LOC110523253 | LOC106570436 | coding | downstream | 294263 | 14148432 ~ 14231585 (+) |
| mmp11b | LOC106570480 | coding | downstream | 418136 | 14272305 ~ 14308719 (+) |
| G369770 | LOC106570345 | non-coding | upstream | 2598 | 13782269 ~ 13797757 (+) |
| G369742 | NA | non-coding | upstream | 76405 | 13723686 ~ 13723950 (+) |
| G369741 | NA | non-coding | upstream | 77913 | 13722083 ~ 13722442 (+) |
| G369734 | NA | non-coding | upstream | 84328 | 13715784 ~ 13716027 (+) |
| G369730 | NA | non-coding | upstream | 86932 | 13713139 ~ 13713423 (+) |
| G369805 | NA | non-coding | downstream | 2395 | 13856564 ~ 13856861 (+) |
| G369820 | NA | non-coding | downstream | 30107 | 13884276 ~ 13886502 (+) |
| G369819 | NA | non-coding | downstream | 32634 | 13886803 ~ 13892285 (+) |
| G369892 | NA | non-coding | downstream | 130207 | 13984376 ~ 13984624 (+) |
| G369878 | NA | non-coding | downstream | 137179 | 13991348 ~ 13995454 (+) |
| G369763 | NA | other | upstream | 31059 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 691221 | 13108696 ~ 13109134 (+) |
| G367684 | NA | other | upstream | 1920320 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 2371645 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 2823203 | 10976682 ~ 10977152 (+) |
| G370360 | NA | other | downstream | 401634 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 466935 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 513503 | 14367672 ~ 14368161 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 950492 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 1194009 | 15047739 ~ 15054353 (+) |
