Gene
RNA
| Item | Value |
|---|---|
| gene id | G369805 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 13856564 ~ 13856861 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU420310 | True | 298 | lncRNA | 0.34 | 1 | 13856564 | 13856861 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gpr107 | LOC106570369 | coding | upstream | 5757 | 13818327 ~ 13850807 (+) |
| LOC110523240 | fpgs | coding | upstream | 38534 | 13806785 ~ 13818030 (+) |
| lmo4a | lmo41 | coding | upstream | 171424 | 13668173 ~ 13685140 (+) |
| ccn1l1 | LOC106570334 | coding | upstream | 204729 | 13647485 ~ 13651835 (+) |
| LOC118964562 | NA | coding | upstream | 212436 | 13613034 ~ 13644128 (+) |
| ncs1a | ncs1 | coding | downstream | 3591 | 13860452 ~ 13882141 (+) |
| arpc5l | arpc5l | coding | downstream | 129834 | 13986695 ~ 13990227 (+) |
| LOC110523252 | LOC106570453 | coding | downstream | 271698 | 14128559 ~ 14142466 (+) |
| LOC110523253 | LOC106570436 | coding | downstream | 291571 | 14148432 ~ 14231585 (+) |
| mmp11b | LOC106570480 | coding | downstream | 415444 | 14272305 ~ 14308719 (+) |
| G369785 | NA | non-coding | upstream | 2395 | 13800355 ~ 13854169 (+) |
| G369770 | LOC106570345 | non-coding | upstream | 58807 | 13782269 ~ 13797757 (+) |
| G369742 | NA | non-coding | upstream | 132614 | 13723686 ~ 13723950 (+) |
| G369741 | NA | non-coding | upstream | 134122 | 13722083 ~ 13722442 (+) |
| G369734 | NA | non-coding | upstream | 140537 | 13715784 ~ 13716027 (+) |
| G369820 | NA | non-coding | downstream | 27415 | 13884276 ~ 13886502 (+) |
| G369819 | NA | non-coding | downstream | 29942 | 13886803 ~ 13892285 (+) |
| G369892 | NA | non-coding | downstream | 127515 | 13984376 ~ 13984624 (+) |
| G369878 | NA | non-coding | downstream | 134487 | 13991348 ~ 13995454 (+) |
| G369936 | NA | non-coding | downstream | 170812 | 14027673 ~ 14034826 (+) |
| G369763 | NA | other | upstream | 87268 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 747430 | 13108696 ~ 13109134 (+) |
| G367684 | NA | other | upstream | 1976529 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 2427854 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 2879412 | 10976682 ~ 10977152 (+) |
| G370360 | NA | other | downstream | 398942 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 464243 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 510811 | 14367672 ~ 14368161 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 947800 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 1191317 | 15047739 ~ 15054353 (+) |
