G369892


Basic Information

Item Value
gene id G369892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13984376 ~ 13984624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420414
aaagtagccaccctttgccttgatgacagctttgcacactcttggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaataggtgtgccttgttaaatgttcatttgtggaatttctttccttcttaatgtgtttgagccaatcagatgtgttgtgacaaggtaggagtggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacagctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU420414 True 249 lncRNA 0.41 1 13984376 13984624

Neighbor

gene id symbol gene type direction distance location
ncs1a ncs1 coding upstream 102235 13860452 ~ 13882141 (+)
gpr107 LOC106570369 coding upstream 133569 13818327 ~ 13850807 (+)
LOC110523240 fpgs coding upstream 166346 13806785 ~ 13818030 (+)
lmo4a lmo41 coding upstream 299236 13668173 ~ 13685140 (+)
ccn1l1 LOC106570334 coding upstream 332541 13647485 ~ 13651835 (+)
arpc5l arpc5l coding downstream 2071 13986695 ~ 13990227 (+)
LOC110523252 LOC106570453 coding downstream 143935 14128559 ~ 14142466 (+)
LOC110523253 LOC106570436 coding downstream 163808 14148432 ~ 14231585 (+)
mmp11b LOC106570480 coding downstream 287681 14272305 ~ 14308719 (+)
LOC110523258 LOC106570496 coding downstream 361009 14345633 ~ 14347412 (+)
G369819 NA non-coding upstream 92091 13886803 ~ 13892285 (+)
G369820 NA non-coding upstream 97874 13884276 ~ 13886502 (+)
G369805 NA non-coding upstream 127515 13856564 ~ 13856861 (+)
G369785 NA non-coding upstream 130207 13800355 ~ 13854169 (+)
G369770 LOC106570345 non-coding upstream 186619 13782269 ~ 13797757 (+)
G369878 NA non-coding downstream 6724 13991348 ~ 13995454 (+)
G369936 NA non-coding downstream 43049 14027673 ~ 14034826 (+)
G369942 NA non-coding downstream 51134 14035758 ~ 14035999 (+)
G369943 NA non-coding downstream 53234 14037858 ~ 14038094 (+)
G369921 LOC100380848 non-coding downstream 54903 14039527 ~ 14040898 (+)
G369763 NA other upstream 215080 13765247 ~ 13769296 (+)
G368440 NA other upstream 875242 13108696 ~ 13109134 (+)
G367684 NA other upstream 2104341 11878329 ~ 11880035 (+)
G366973 NA other upstream 2555666 11425642 ~ 11428710 (+)
G366748 NA other upstream 3007224 10976682 ~ 10977152 (+)
G370360 NA other downstream 271179 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 336480 14321104 ~ 14325895 (+)
G370414 NA other downstream 383048 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 820037 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 1063554 15047739 ~ 15054353 (+)

Expression


Co-expression Network