G369947



Basic Information


Item Value
gene id G369947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14055494 ~ 14055795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU420469
ggggttcataagtaagcatttcactgtaaggtctactatacctgttgtattcggtgcatgtgactaataacatttgatttgatttgaaaatggtGTGCAAAAATAAAACAGCCAGAATGCAATACCATCAACCAACCACACCATGTCAGTCAAGTACCATAAATGAAACCTGTCAATTGGCATAATTGAAACTAAGACATGTTGAAACCTGAACTCAATAACATGAATTCAATGCTGATGACATTTTTTTGGCAAAATTCACAAATAAAACAGGATATATTTTCCTACTCTGTTACATATGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU420469 True 302 lncRNA 0.34 1 14055494 14055795

Neighbor


gene id symbol gene type direction distance location
arpc5l arpc5l coding upstream 65267 13986695 ~ 13990227 (+)
ncs1a ncs1 coding upstream 173353 13860452 ~ 13882141 (+)
gpr107 LOC106570369 coding upstream 204687 13818327 ~ 13850807 (+)
LOC110523240 fpgs coding upstream 237464 13806785 ~ 13818030 (+)
lmo4a lmo41 coding upstream 370354 13668173 ~ 13685140 (+)
LOC110523252 LOC106570453 coding downstream 72764 14128559 ~ 14142466 (+)
LOC110523253 LOC106570436 coding downstream 92637 14148432 ~ 14231585 (+)
mmp11b LOC106570480 coding downstream 216510 14272305 ~ 14308719 (+)
LOC110523258 LOC106570496 coding downstream 289838 14345633 ~ 14347412 (+)
LOC110523259 odf2 coding downstream 295658 14351453 ~ 14367540 (+)
G369921 LOC100380848 non-coding upstream 14596 14039527 ~ 14040898 (+)
G369943 NA non-coding upstream 17400 14037858 ~ 14038094 (+)
G369942 NA non-coding upstream 19495 14035758 ~ 14035999 (+)
G369936 NA non-coding upstream 20668 14027673 ~ 14034826 (+)
G369878 NA non-coding upstream 60040 13991348 ~ 13995454 (+)
G369948 LOC106570668 non-coding downstream 2580 14058375 ~ 14059295 (+)
G369949 NA non-coding downstream 3689 14059484 ~ 14059722 (+)
G369950 NA non-coding downstream 4420 14060215 ~ 14060713 (+)
G369952 NA non-coding downstream 5923 14061718 ~ 14061936 (+)
G369953 NA non-coding downstream 6291 14062086 ~ 14062313 (+)
G369763 NA other upstream 286198 13765247 ~ 13769296 (+)
G368440 NA other upstream 946360 13108696 ~ 13109134 (+)
G367684 NA other upstream 2175459 11878329 ~ 11880035 (+)
G366973 NA other upstream 2626784 11425642 ~ 11428710 (+)
G366748 NA other upstream 3078342 10976682 ~ 10977152 (+)
G370360 NA other downstream 200008 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 265309 14321104 ~ 14325895 (+)
G370414 NA other downstream 311877 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 748866 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 992383 15047739 ~ 15054353 (+)

Expression



Co-expression Network