G370256 (LOC100194703)


Basic Information

Item Value
gene id G370256
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14099032 ~ 14100477 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420803
tgttcttaggcaaaattgtgagtgagcccactcccttggctgagaagcaaccccacacatgaagggtctcaggatgctttactgttggcatgacacaggactgatggtaagcgctcaccttgtcttctccggacaagcttttttccgggtgccctaaacaatcggaaaggggattcatcagagaaaatgactttacctcagtcctcagcagtccaatccctgtaccttttgcagaatatcagtctgtccctgatgtttttcctggagagaagtggcttcatTGCTtgccttcttgacaccaggccatcctcaaagtcttcgcttcactgtgcgtgcagatgcactcacacctgcctgctgccattcctgagcaatctctgtactggtggtgccccgatcccgcagctgaatcaactttaggagacggtcctgtcgcttgctggactttcttgggcgccctgaagccttcttcacaacaattgaaccgctctccttgaagttcttgatgatccgataaatggttgatttaggtgcaatcttactggcagcaatatctttgcctgtgaagccctttttgtgcaaagcaatgatgacggcatgtgtttccttgcaggtaaccatggttgacagaggaagaacaatgattccaagcaccaccctccttttgaaggttccagtctgttattcgaactcaatcagtatgacagagtgatctccagccttgtcctcgtcaacactcacacctgtgttaacgagagaatcactgacatgtcagctggtccttttgtggcagggctgaaatccAGTGGAAGTGTTTTTTGggtattcagttcatttgcatggcaaagagggactttgcaattaattgcaattcatctggtcactcttcataacattctggagtttatgcaaattgtgaaaattaatatttgtgtcatacTCGAAACATTTAGCCACGACTAGTTGCTCAGGTATAAGTCAAATCTCTGATTAAAGTGTGGCATTACAACAATAGAAGAGTTGATTTCAGCACATAGTGTGGGACAAGGCTTGGTAGAAGTTGCGCCTCACCACTGTTAAAGGGGCCGACTCCCTCTAGAATTGGGGATAGAGCAAATTGAGGATAATGGCTAGCATCTACCGCCATGTTGATCATGCCTTCTTCCAATACTGGATTTTATTCACATTTGATACAAAATGTTGCATCACAGATGTACACAAACTGTAGCATAATTATCTGGTTAACTGTACTGAGATTATGATTGAAGAATTGGCTAGATCAAGGCcctttataacaaggtatttatCTGAAGCAACCAACATGGCCTTTGGATTGGGACCATCTCATTTCAAATGTCAAACTCTTAAGGGTGTTAATAAAGCATTTGAATTGTAATTAATGACATGAAGATTGGAGAATAAGCAGaatgtaaaataataaaaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU420803 True 1446 lncRNA 0.43 1 14099032 14100477

Neighbor

gene id symbol gene type direction distance location
LOC118964564 gstt2b coding downstream 6125 14090638 ~ 14092907 (-)
p2rx4a p2rx4 coding downstream 18418 14063020 ~ 14080614 (-)
si:dkey-220k22.3 LOC106570668 coding downstream 38316 14057565 ~ 14060716 (-)
LOC110523246 ppp6c coding downstream 46731 14039378 ~ 14052301 (-)
LOC118964563 NA coding downstream 94340 14004305 ~ 14005852 (-)
LOC110523249 LOC106570430 coding upstream 1850 14102327 ~ 14104808 (-)
LOC110523251 LOC106570444 coding upstream 5288 14105765 ~ 14128552 (-)
LOC118964565 NA coding upstream 69944 14170421 ~ 14172474 (-)
LOC118964566 NA coding upstream 121712 14222189 ~ 14225345 (-)
LOC118964567 LOC106570461 coding upstream 142577 14243054 ~ 14243735 (-)
G370258 NA non-coding downstream 1145 14097395 ~ 14097887 (-)
G370278 NA non-coding downstream 8679 14089993 ~ 14090353 (-)
G370251 NA non-coding downstream 62224 14036525 ~ 14036808 (-)
G370250 NA non-coding downstream 62570 14036223 ~ 14036462 (-)
G370297 NA non-coding upstream 39376 14139853 ~ 14140429 (-)
G370286 NA non-coding upstream 42803 14143280 ~ 14145174 (-)
G370287 NA non-coding upstream 44978 14145455 ~ 14147544 (-)
G370298 NA non-coding upstream 48019 14148496 ~ 14150068 (-)
G368921 NA other downstream 1392940 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 1962242 12134052 ~ 12136790 (-)
G365752 NA other downstream 4908934 9189669 ~ 9190098 (-)
G364754 NA other downstream 5048324 9047542 ~ 9099000 (-)
G364322 NA other downstream 5794849 8303267 ~ 8304183 (-)
G370333 NA other upstream 106713 14207190 ~ 14208705 (-)
G370635 NA other upstream 326861 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 892651 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 1022998 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1595615 15693396 ~ 15707607 (-)

Expression


Co-expression Network