G370297


Basic Information

Item Value
gene id G370297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14139853 ~ 14140429 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420846
CCAGGAGTCCGTCGCTCACCAGTTTAATGTAGAGCTCCATGTCCTTCTCCTTGAGCATGGAGTAGACGCTCTCCATCTTGTAGGTGATGCCGCACTGTGAGTCGTCCAGACTCTTGATGAACATGTCCCGGTTCTCCGACATCAGGTTGGTGAAACAAAAGAAGGTGTCCGCCTCAGCGTGCTCTGATTGGTTGGACGGTCAATTAGTAaaccagtcaatcaatcagtcaatcgtGCACTAACTAGTTTcaattgtgtctgtctgtctatatatgaCAGACGTTAAAATACTTCTAAATGGAGGTCAAGCAATAAATATCTGAGAATTAGAAGTGATCGGGAAGAAGGGGGGGTCCCTCATTTGTCCTCTAGCTGGCAGTCCTGAATCAGTTAGCTTGATCCATTCCATCACAGAACACCCATTCCGTCACAGAACACCCATTCCTTCACAGAACACCCATTCCTTCACAGAACACCCATTCCTTCACAGAACACCCATTCCTTCACAGAACATTAGCACTCTGATGCAGACAAGTGcaatccccattgagaccgtgtctgtgccttgacctaggtt

Function

NR:

description
PREDICTED: TBC1 domain family member 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU420846 True 577 lncRNA 0.47 1 14139853 14140429

Neighbor

gene id symbol gene type direction distance location
LOC110523251 LOC106570444 coding downstream 11301 14105765 ~ 14128552 (-)
LOC110523249 LOC106570430 coding downstream 35045 14102327 ~ 14104808 (-)
LOC118964564 gstt2b coding downstream 46946 14090638 ~ 14092907 (-)
p2rx4a p2rx4 coding downstream 59239 14063020 ~ 14080614 (-)
si:dkey-220k22.3 LOC106570668 coding downstream 79137 14057565 ~ 14060716 (-)
LOC118964565 NA coding upstream 29992 14170421 ~ 14172474 (-)
LOC118964566 NA coding upstream 81760 14222189 ~ 14225345 (-)
LOC118964567 LOC106570461 coding upstream 102625 14243054 ~ 14243735 (-)
chchd10 chchd10 coding upstream 115371 14255800 ~ 14259132 (-)
smarcb1b LOC100380734 coding upstream 173285 14313714 ~ 14333305 (-)
G370256 LOC100194703 non-coding downstream 39376 14099032 ~ 14100477 (-)
G370258 NA non-coding downstream 41966 14097395 ~ 14097887 (-)
G370278 NA non-coding downstream 49500 14089993 ~ 14090353 (-)
G370286 NA non-coding upstream 2851 14143280 ~ 14145174 (-)
G370287 NA non-coding upstream 5026 14145455 ~ 14147544 (-)
G370298 NA non-coding upstream 8067 14148496 ~ 14150068 (-)
G370314 NA non-coding upstream 36042 14176471 ~ 14177082 (-)
G370341 NA non-coding upstream 78829 14219258 ~ 14220167 (-)
G368921 NA other downstream 1433761 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 2003063 12134052 ~ 12136790 (-)
G365752 NA other downstream 4949755 9189669 ~ 9190098 (-)
G364754 NA other downstream 5089145 9047542 ~ 9099000 (-)
G364322 NA other downstream 5835670 8303267 ~ 8304183 (-)
G370333 NA other upstream 66761 14207190 ~ 14208705 (-)
G370635 NA other upstream 286909 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 852699 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 983046 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1555663 15693396 ~ 15707607 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G59716 NA non-coding CM030127.1 CM030127.1 3117214 ~ 3117452 (+)