G370286


Basic Information

Item Value
gene id G370286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14143280 ~ 14145174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU420835
AACCACGGGGAAAGGGTGTAAAGTAAAAACTGTACTTGTTGCACACTTGGCATTTATTATAAAAGGGCCTGAAAATACACAAAGAAGAACCCTTAGAGAAGAATATGGCTACACATAGCATTGTCTAATTCCTGATGTAATCACTATACAGATTTATATAATCGCCACTGGCAACAATGCAATGTTGTCCTTCCACATAGTCAAAGACGTTAAGGATTTTTAAGACAATGGAGGATATGTCAAATCAGAGCACAACACgctggacaatttacattgttGCCCTGTGTAGCAGTGGCATGACAAACATTAATCTGACACCAAGGACAATGTGGTGCGAATAACAAACAGACAACGACAAAAGACTGTTCAGCCATGTTAAATTCAACGGAGGATAAATGTTACAGAAAAAGCCATCGACATGCAGGATTACAAAATATATTCTTATATTTAATGATGAGTATGCATTCTCCCTATCTAGCCCTGTTATTCTCAAGTCCACAATTATAGTAGCTTTTTGCCACATAGGATTTGCTGTCTACCGTCAAACGGTTGGCAGAGATGAGACCAGAGGCAGTGAGCTGCTTTCTAAAACAGTCTCAATATAGCTGTAAAACAGATAGTTTGTGGTCCACAAATTGAATGTCTGCTGGATGAGAAACAGAGCGATATGATAAGAGGGAGAATGGCAGTGCATGACGGTTGGCAGGCGGACTGTGGCACGGGGCCTACTGTCTTGCTGCTAGCCCTATCCTGGACAAGCCCTCAAAAATCACAGGgcaaggaggggaggaagaggtggGAGAAAGGCAAGAGCCATGGAAAAATGGAAAAAAGGAAAGGAAAAAAATTGTGATAGAGCAAAACAAGAACGAGAAAATGTTAGAGAACCATAAACCATTCATCATTGACAACAAACGTTTGTGAATCACAGGAAGACAAGACTTTCCTTTTTGTCATTACTGAATCTTCAAGGGGGGGGATTTGTCACTGTTTATATACATTCATTAAAAGGTTCAATGCAGCTTGGTTTTTTTCCCCCACACAAGTATCAAATTATTTctaggtaacaattaagtaccttactgtgattgtttgaaattaaaatggtcaaaagaaaaaaaaatagcttcttagcaaagagcaatttctcaagcaagatcTTGGCTAAGACTGTCAGGGAGGCTAGGGACTAGGGGAGTAGGGAGGgggaactgaaaactagctgttattggcagagaggtttggaaatcTTTATTAACCAATTCaccacatggtgatgtcaccatggaaggccaaaactccctcccaccaaaacaggctgaaatttcaggaagtattttcaaacagctcttacactaaaagggcattatcataattttcacaatttcagtaTGAATCCAACCTCGGTGTGGAAATAtgtaaaacacagggaaatcaagtttttgactgcactgggcctttaagatcAAGACATGATTATAGACACACTGATCGACCAAGCCAAGCTGTTTGAACTAGGAGTGTTCCCATTTCATTCAGTGTCAAAATACTCAGCACAGTATCTCTTACTACCTCACTTTAGTACAATAAAGCCACATTGAACCATCGCTAGTCACAGACTGTCAATTTGTACCAATTCCTGTCTAGGCAATTTTTCAGTAGGAACATACCATCTTGCTACTGATATTGTGTTAGAATGTAGACTAATACCATCTTGCTACTGAAATAGTGTTAGACTGTAGACTAATACCATCTTGTTACTGAAATAGTGTTAGAATTTAGACTAATACCATCTTGTTACTGAAATAGAGTTAGAATGTAGACTGAAGCCTCCTGAGTGGCgtagtggtctaagacactgcatcgcagtgcaacagtagctgtgccactagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU420835 True 1895 lncRNA 0.40 1 14143280 14145174

Neighbor

gene id symbol gene type direction distance location
LOC110523251 LOC106570444 coding downstream 14728 14105765 ~ 14128552 (-)
LOC110523249 LOC106570430 coding downstream 38472 14102327 ~ 14104808 (-)
LOC118964564 gstt2b coding downstream 50373 14090638 ~ 14092907 (-)
p2rx4a p2rx4 coding downstream 62666 14063020 ~ 14080614 (-)
si:dkey-220k22.3 LOC106570668 coding downstream 82564 14057565 ~ 14060716 (-)
LOC118964565 NA coding upstream 25247 14170421 ~ 14172474 (-)
LOC118964566 NA coding upstream 77015 14222189 ~ 14225345 (-)
LOC118964567 LOC106570461 coding upstream 97880 14243054 ~ 14243735 (-)
chchd10 chchd10 coding upstream 110626 14255800 ~ 14259132 (-)
smarcb1b LOC100380734 coding upstream 168540 14313714 ~ 14333305 (-)
G370297 NA non-coding downstream 2851 14139853 ~ 14140429 (-)
G370256 LOC100194703 non-coding downstream 42803 14099032 ~ 14100477 (-)
G370258 NA non-coding downstream 45393 14097395 ~ 14097887 (-)
G370287 NA non-coding upstream 281 14145455 ~ 14147544 (-)
G370298 NA non-coding upstream 3322 14148496 ~ 14150068 (-)
G370314 NA non-coding upstream 31297 14176471 ~ 14177082 (-)
G370341 NA non-coding upstream 74084 14219258 ~ 14220167 (-)
G370342 NA non-coding upstream 77867 14223041 ~ 14224058 (-)
G368921 NA other downstream 1437188 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 2006490 12134052 ~ 12136790 (-)
G365752 NA other downstream 4953182 9189669 ~ 9190098 (-)
G364754 NA other downstream 5092572 9047542 ~ 9099000 (-)
G364322 NA other downstream 5839097 8303267 ~ 8304183 (-)
G370333 NA other upstream 62016 14207190 ~ 14208705 (-)
G370635 NA other upstream 282164 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 847954 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 978301 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1550918 15693396 ~ 15707607 (-)

Expression


Co-expression Network