G370314



Basic Information


Item Value
gene id G370314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14176471 ~ 14177082 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU420863
ccAATTtttactttttctccccaatttcgtgatatcccaTTGGTAGTCTTGTCCCATTGGTAGTCTTATCCCATTGGTAGTCTTGTCCCATTGGTagtcttGTCCCATTGGTAGTCTTGTCCCATTggtagtcttgtcccatcgctgaaaCTCCCGTATGGAcacaggagaggcgaaggtcgagggccatacgtcctccgaaacacgaccttGCCAGACAGGTTGTGTCCCACATctaaaatcagtccctgattcaAGGGGGAAAATGaagaaatgcagtggaactggcttcgaagtccagagttgagtttgagggacaTAGCCTATTACTGACATCACCAGCGAGGCAGTGTGTTATTTGGAAAGTAGAAAACATACTGCTTGGACAACAGTCAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU420863 True 397 lncRNA 0.47 2 14176471 14177082

Neighbor


gene id symbol gene type direction distance location
LOC118964565 NA coding downstream 3997 14170421 ~ 14172474 (-)
LOC110523251 LOC106570444 coding downstream 47919 14105765 ~ 14128552 (-)
LOC110523249 LOC106570430 coding downstream 71663 14102327 ~ 14104808 (-)
LOC118964564 gstt2b coding downstream 83564 14090638 ~ 14092907 (-)
p2rx4a p2rx4 coding downstream 95857 14063020 ~ 14080614 (-)
LOC118964566 NA coding upstream 45107 14222189 ~ 14225345 (-)
LOC118964567 LOC106570461 coding upstream 65972 14243054 ~ 14243735 (-)
chchd10 chchd10 coding upstream 78718 14255800 ~ 14259132 (-)
smarcb1b LOC100380734 coding upstream 136632 14313714 ~ 14333305 (-)
LOC110523260 NA coding upstream 172234 14346815 ~ 14350281 (-)
G370298 NA non-coding downstream 26403 14148496 ~ 14150068 (-)
G370287 NA non-coding downstream 28927 14145455 ~ 14147544 (-)
G370286 NA non-coding downstream 31297 14143280 ~ 14145174 (-)
G370297 NA non-coding downstream 36042 14139853 ~ 14140429 (-)
G370341 NA non-coding upstream 42176 14219258 ~ 14220167 (-)
G370342 NA non-coding upstream 45959 14223041 ~ 14224058 (-)
G370315 NA non-coding upstream 49545 14226627 ~ 14231588 (-)
G370352 NA non-coding upstream 67343 14244425 ~ 14251246 (-)
G370622 NA non-coding upstream 133208 14310290 ~ 14310506 (-)
G368921 NA other downstream 1470379 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 2039681 12134052 ~ 12136790 (-)
G365752 NA other downstream 4986373 9189669 ~ 9190098 (-)
G364754 NA other downstream 5125763 9047542 ~ 9099000 (-)
G364322 NA other downstream 5872288 8303267 ~ 8304183 (-)
G370333 NA other upstream 30108 14207190 ~ 14208705 (-)
G370635 NA other upstream 250256 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 816046 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 946393 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1519010 15693396 ~ 15707607 (-)

Expression



Co-expression Network