G370443


Basic Information

Item Value
gene id G370443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14311549 ~ 14311842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU421014
aggcacttaaatctttcgttttgcccattcaccctctgaatggcacacatacacaatccatgtctcaatgctttaaaatccttctttaacccgtctcctccacactgattgaagtggatttaaaaattTGAAATAGCATTCACATGGATTCACAtgctcagtctatgtcatggaaagagaaggtggtCCCAATGTTTTATATACTCAGTGTAGATCAGTTTTTTACAAAATTTCACAATGCAGTCCAGATTCTTTCATTAGTAATGTCTCCAGAAGGGAATATGGAAAGAAAGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421014 True 294 lncRNA 0.37 1 14311549 14311842

Neighbor

gene id symbol gene type direction distance location
mmp11b LOC106570480 coding upstream 2830 14272305 ~ 14308719 (+)
LOC110523253 LOC106570436 coding upstream 82241 14148432 ~ 14231585 (+)
LOC110523252 LOC106570453 coding upstream 169083 14128559 ~ 14142466 (+)
arpc5l arpc5l coding upstream 321322 13986695 ~ 13990227 (+)
ncs1a ncs1 coding upstream 429408 13860452 ~ 13882141 (+)
LOC110523258 LOC106570496 coding downstream 33791 14345633 ~ 14347412 (+)
LOC110523259 odf2 coding downstream 39611 14351453 ~ 14367540 (+)
LOC110523261 sptan1 coding downstream 65117 14376959 ~ 14429468 (+)
LOC118964781 NA coding downstream 84968 14396810 ~ 14396945 (+)
uap1l1 uap1l1 coding downstream 126274 14438116 ~ 14447360 (+)
G370442 NA non-coding upstream 1044 14310022 ~ 14310505 (+)
G370022 NA non-coding upstream 60351 14244259 ~ 14251198 (+)
G369974 NA non-coding upstream 164005 14145981 ~ 14147544 (+)
G369972 NA non-coding upstream 166445 14143417 ~ 14145104 (+)
G370444 NA non-coding downstream 327 14312169 ~ 14312573 (+)
G370452 NA non-coding downstream 27507 14339349 ~ 14339582 (+)
G370453 NA non-coding downstream 31505 14343347 ~ 14343596 (+)
G370454 NA non-coding downstream 31831 14343673 ~ 14343947 (+)
G370428 NA non-coding downstream 33142 14344984 ~ 14345550 (+)
G370360 NA other upstream 52416 14255803 ~ 14259133 (+)
G369763 NA other upstream 542253 13765247 ~ 13769296 (+)
G368440 NA other upstream 1202415 13108696 ~ 13109134 (+)
G367684 NA other upstream 2431514 11878329 ~ 11880035 (+)
G366973 NA other upstream 2882839 11425642 ~ 11428710 (+)
G370382 smarcb1 other downstream 9262 14321104 ~ 14325895 (+)
G370414 NA other downstream 55830 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 492819 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 736336 15047739 ~ 15054353 (+)
G371182 NA other downstream 812448 15124290 ~ 15128817 (+)

Expression


Co-expression Network