Gene
RNA
| Item | Value |
|---|---|
| gene id | G370453 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14343347 ~ 14343596 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU421024 | True | 250 | lncRNA | 0.37 | 1 | 14343347 | 14343596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mmp11b | LOC106570480 | coding | upstream | 34628 | 14272305 ~ 14308719 (+) |
| LOC110523253 | LOC106570436 | coding | upstream | 114039 | 14148432 ~ 14231585 (+) |
| LOC110523252 | LOC106570453 | coding | upstream | 200881 | 14128559 ~ 14142466 (+) |
| arpc5l | arpc5l | coding | upstream | 353120 | 13986695 ~ 13990227 (+) |
| ncs1a | ncs1 | coding | upstream | 461206 | 13860452 ~ 13882141 (+) |
| LOC110523258 | LOC106570496 | coding | downstream | 2037 | 14345633 ~ 14347412 (+) |
| LOC110523259 | odf2 | coding | downstream | 7857 | 14351453 ~ 14367540 (+) |
| LOC110523261 | sptan1 | coding | downstream | 33363 | 14376959 ~ 14429468 (+) |
| LOC118964781 | NA | coding | downstream | 53214 | 14396810 ~ 14396945 (+) |
| uap1l1 | uap1l1 | coding | downstream | 94520 | 14438116 ~ 14447360 (+) |
| G370452 | NA | non-coding | upstream | 3765 | 14339349 ~ 14339582 (+) |
| G370444 | NA | non-coding | upstream | 30774 | 14312169 ~ 14312573 (+) |
| G370443 | NA | non-coding | upstream | 31505 | 14311549 ~ 14311842 (+) |
| G370442 | NA | non-coding | upstream | 32842 | 14310022 ~ 14310505 (+) |
| G370022 | NA | non-coding | upstream | 92149 | 14244259 ~ 14251198 (+) |
| G370454 | NA | non-coding | downstream | 77 | 14343673 ~ 14343947 (+) |
| G370428 | NA | non-coding | downstream | 1388 | 14344984 ~ 14345550 (+) |
| G370455 | NA | non-coding | downstream | 7244 | 14350840 ~ 14351142 (+) |
| G370403 | NA | non-coding | downstream | 25413 | 14369009 ~ 14369485 (+) |
| G370457 | NA | non-coding | downstream | 25906 | 14369502 ~ 14369738 (+) |
| G370382 | smarcb1 | other | upstream | 17452 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 84214 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 574051 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 1234213 | 13108696 ~ 13109134 (+) |
| G367684 | NA | other | upstream | 2463312 | 11878329 ~ 11880035 (+) |
| G370414 | NA | other | downstream | 24076 | 14367672 ~ 14368161 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 461065 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 704582 | 15047739 ~ 15054353 (+) |
| G371182 | NA | other | downstream | 780694 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 1447963 | 15791559 ~ 15795122 (+) |
