Gene
RNA
| Item | Value |
|---|---|
| gene id | G370428 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14344984 ~ 14345550 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU420999 | True | 567 | lncRNA | 0.31 | 1 | 14344984 | 14345550 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mmp11b | LOC106570480 | coding | upstream | 36265 | 14272305 ~ 14308719 (+) |
| LOC110523253 | LOC106570436 | coding | upstream | 115676 | 14148432 ~ 14231585 (+) |
| LOC110523252 | LOC106570453 | coding | upstream | 202518 | 14128559 ~ 14142466 (+) |
| arpc5l | arpc5l | coding | upstream | 354757 | 13986695 ~ 13990227 (+) |
| ncs1a | ncs1 | coding | upstream | 462843 | 13860452 ~ 13882141 (+) |
| LOC110523258 | LOC106570496 | coding | downstream | 83 | 14345633 ~ 14347412 (+) |
| LOC110523259 | odf2 | coding | downstream | 5903 | 14351453 ~ 14367540 (+) |
| LOC110523261 | sptan1 | coding | downstream | 31409 | 14376959 ~ 14429468 (+) |
| LOC118964781 | NA | coding | downstream | 51260 | 14396810 ~ 14396945 (+) |
| uap1l1 | uap1l1 | coding | downstream | 92566 | 14438116 ~ 14447360 (+) |
| G370454 | NA | non-coding | upstream | 1037 | 14343673 ~ 14343947 (+) |
| G370453 | NA | non-coding | upstream | 1388 | 14343347 ~ 14343596 (+) |
| G370452 | NA | non-coding | upstream | 5402 | 14339349 ~ 14339582 (+) |
| G370444 | NA | non-coding | upstream | 32411 | 14312169 ~ 14312573 (+) |
| G370443 | NA | non-coding | upstream | 33142 | 14311549 ~ 14311842 (+) |
| G370455 | NA | non-coding | downstream | 5290 | 14350840 ~ 14351142 (+) |
| G370403 | NA | non-coding | downstream | 23459 | 14369009 ~ 14369485 (+) |
| G370457 | NA | non-coding | downstream | 23952 | 14369502 ~ 14369738 (+) |
| G370458 | NA | non-coding | downstream | 24445 | 14369995 ~ 14370231 (+) |
| G370472 | NA | non-coding | downstream | 56289 | 14401839 ~ 14402147 (+) |
| G370382 | smarcb1 | other | upstream | 19089 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 85851 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 575688 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 1235850 | 13108696 ~ 13109134 (+) |
| G367684 | NA | other | upstream | 2464949 | 11878329 ~ 11880035 (+) |
| G370414 | NA | other | downstream | 22122 | 14367672 ~ 14368161 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 459111 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 702628 | 15047739 ~ 15054353 (+) |
| G371182 | NA | other | downstream | 778740 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 1446009 | 15791559 ~ 15795122 (+) |
