G370652



Basic Information


Item Value
gene id G370652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14355426 ~ 14356293 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU421231
tgcattttgaaaacatatattGGTTTCTTAgcatggttggggtcaattcagtcAACTGAGGAAGTTAACTAATATCCCCATTGAAAATAACTAATAGTCTGAATTGGCATGTCAATCCATCCCCTGAATTGAAATTGTGCTGAACCCCCTAACCCTGTCTCTGTTGTCACTCACACTGGTGCTGACACTCCTCATCTTAGTGACGGTCTCTCTGAGGGCTGACACCTGTATTGCAGCTTCTGTCCCATCTATCTCAGCCTCCATCAACTTCCTGAGCAGAGTGTCCTTCTCCAGCTGCATCGACTCCATAGACCTCTCTAGTCTGGACAGATGTGTAGGCAGACGTCGTGTGAGAGGCAGAGGAATTGCAGATTGTGAATATGGGACACAGAAAGGAAAGATtgttgtattataaactgggtggtttgagccctgaatgctgattggctgacagacgtggtatatcagactgtataccacatttatttttactgctctaattatgttggttaccagtttataatagcaataatgcatcttgggggtttgtggtatatggctaatggTTCTACCACATCCCCACAGgctttattgcttaattatacactaagtatacaaaacattaagaacaccttcctaatattgagttgcaccccctttatccctcagaacagcctcaattcgttggcgcctggactctacaaggtgtcgatgctggcctatgttgactccattgcttcccacaattgtgtcaagttggctggatgtcctttgggtgttgtaccattcttgacacacacgggaaactgttgagcgtaaaaaacccagcagcgctgcagttgTTGACAGAAACCGccgcgcctggcac

Function


NR:

description
PREDICTED: outer dense fiber protein 2 isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU421231 True 868 lncRNA 0.45 1 14355426 14356293

Neighbor


gene id symbol gene type direction distance location
LOC110523260 NA coding downstream 5145 14346815 ~ 14350281 (-)
smarcb1b LOC100380734 coding downstream 22121 14313714 ~ 14333305 (-)
chchd10 chchd10 coding downstream 96294 14255800 ~ 14259132 (-)
LOC118964567 LOC106570461 coding downstream 111691 14243054 ~ 14243735 (-)
LOC118964566 NA coding downstream 130081 14222189 ~ 14225345 (-)
dync2i2 wdr34 coding upstream 73176 14429469 ~ 14433766 (-)
LOC110523265 LOC106570595 coding upstream 77953 14434246 ~ 14438495 (-)
pkn3 pkn3 coding upstream 104525 14460818 ~ 14480420 (-)
slc25a25b LOC106570619 coding upstream 131457 14487750 ~ 14535122 (-)
LOC110523275 NA coding upstream 409883 14766176 ~ 14769160 (-)
G370648 NA non-coding downstream 12888 14342211 ~ 14342538 (-)
G370646 NA non-coding downstream 15911 14339296 ~ 14339515 (-)
G370622 NA non-coding downstream 44920 14310290 ~ 14310506 (-)
G370352 NA non-coding downstream 104180 14244425 ~ 14251246 (-)
G370653 odf2 non-coding upstream 1153 14357446 ~ 14358123 (-)
G370656 NA non-coding upstream 7244 14363537 ~ 14365844 (-)
G370658 NA non-coding upstream 12332 14368625 ~ 14368840 (-)
G370659 NA non-coding upstream 13774 14370067 ~ 14370272 (-)
G370631 LOC102778734 non-coding upstream 52801 14409094 ~ 14410047 (-)
G370333 NA other downstream 146721 14207190 ~ 14208705 (-)
G368921 NA other downstream 1649334 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 2218636 12134052 ~ 12136790 (-)
G365752 NA other downstream 5165328 9189669 ~ 9190098 (-)
G364754 NA other downstream 5304718 9047542 ~ 9099000 (-)
G370635 NA other upstream 71045 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 636835 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 767182 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1339799 15693396 ~ 15707607 (-)
G372122 NA other upstream 1619313 15975606 ~ 15976116 (-)

Expression



Co-expression Network